RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJEB3181" and tax_kingdom = "Methanobacteriati"

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analysis 2

tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Methanobacteriati · 2 ✖

bioproject 1

  • PRJEB3181 · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
23007972 23007972 PRJEB3181_P_NODE_18199_length_194_cov_2.631902_g17935_i0 PRJEB3181 18199 194 2.631902 5.10588988 Salarchaeum sp. JOR-1 2599399 Archaea Archaea 52.8 0.017   NTclustered gi|1717336197|gb|CP042241.1| 2599399 g17935 i0 96.875 0.164948453608247 32 0 16 1 110 140 2048089 2048120 Salarchaeum sp. JOR-1 chromosome, complete genome blastn 32 52.8 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halobacteriaceae Salarchaeum Salarchaeum sp. JOR-1
29717185 29717185 PRJEB3181_P_NODE_5030_length_360_cov_4.930091_g4781_i0 PRJEB3181 5030 360 4.930091 17.7483276 Methanocaldococcus villosus 667126 Archaea Archaea 62.4 2.33e-9   NR WP_004592618.1 667126 g4781 i0 44.6 0.691666666666667 83 28 69.2 2 360 112 76 140 WP_004592618.1 30S ribosomal protein S19e [Methanocaldococcus villosus] diamond 249 62.4 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanococci Methanococcales Methanocaldococcaceae Methanocaldococcus Methanocaldococcus villosus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;