RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJEB3181", tax_kingdom = "Fungi" and tax_phylum = "Cryptomycota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Cryptomycota · 4 ✖

tax_kingdom 1

  • Fungi · 4 ✖

tax_clade 1

bioproject 1

  • PRJEB3181 · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
10258761 10258761 PRJEB3181_P_NODE_9749_length_271_cov_134.408333_g9485_i0 PRJEB3181 9749 271 134.408333 364.24658243 Cryptomycota sp. 2012228 Fungi Fungi 283 8.1e-72   NTclustered gi|2468790980|gb|OQ702912.1| 2012228 g9485 i0 85.612 103.121771217712 278 30 100 7 1 271 2480 2206 Cryptomycota sp. isolate PSC211 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 27946 283 1 Eukaryota Opisthokonta Fungi Cryptomycota         Cryptomycota sp.
20456803 20456803 PRJEB3181_P_NODE_6997_length_316_cov_2.964912_g6736_i0 PRJEB3181 6997 316 2.964912 9.36912192 Paramicrosporidium saccamoebae 1246581 Fungi Fungi 110 2.29e-27   NR PJF16614.1 1246581 g6736 i0 80 0.712025316455696 75 15 71.2 0 2 226 154 228 PJF16614.1 40S ribosomal protein S6 [Paramicrosporidium saccamoebae] diamond 225 110 1 Eukaryota Opisthokonta Fungi Cryptomycota       Paramicrosporidium Paramicrosporidium saccamoebae
24281689 24281689 PRJEB3181_P_NODE_10180_length_266_cov_5.395745_g9916_i0 PRJEB3181 10180 266 5.395745 14.3526817 Rozella allomycis CSF55 988480 Fungi Fungi 83.6 3.57e-17   NR EPZ34692.1 988480 g9916 i0 66.2 3.54135338345865 65 21 72.2 1 245 54 190 254 EPZ34692.1 Nucleic acid-binding domain-containing protein [Rozella allomycis CSF55] diamond 942 83.6 1 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella allomycis
27222743 27222743 PRJEB3181_P_NODE_15063_length_217_cov_1.532258_g14799_i0 PRJEB3181 15063 217 1.532258 3.32499986 Rozella allomycis CSF55 988480 Fungi Fungi 59.3 3.75e-8   NR RKP19799.1 988480 g14799 i0 56.9 0.705069124423963 51 21 70.5 1 215 63 584 633 RKP19799.1 P-loop containing nucleoside triphosphate hydrolase protein, partial [Rozella allomycis CSF55] diamond 153 59.3 1 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella allomycis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;