RNAquarium Metadata Server
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contig_metadata

8 rows where bioproject = "PRJEB3181", tax_kingdom = "Fungi" and tax_phylum = "Blastocladiomycota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Blastocladiomycota · 8 ✖

tax_kingdom 1

  • Fungi · 8 ✖

tax_clade 1

bioproject 1

  • PRJEB3181 · 8 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
56043 56043 PRJEB3181_P_NODE_6021_length_335_cov_8.082237_g5764_i0 PRJEB3181 6021 335 8.082237 27.07549395 Catenophlyctis variabilis 945688 Fungi Fungi 156 2.34e-33   NTclustered gi|82398236|gb|DQ273780.1| 945688 g5764 i0 87.879 39.4865671641791 132 16 39 0 1 132 1265 1396 Catenophlyctis sp. JEL298 isolate AFTOL-ID 36 28S ribosomal RNA gene, partial sequence blastn 13228 156 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Catenariaceae Catenophlyctis Catenophlyctis variabilis
6434395 6434395 PRJEB3181_S_NODE_9886_length_202_cov_2.305389_g9593_i0 PRJEB3181 9886 202 2.305389 4.65688578 Paraphysoderma sedebokerense 1500003 Fungi Fungi 75.1 4.05e-15   NR KAI9137837.1 1500003 g9593 i0 72.3 6.98019801980198 47 13 69.8 0 201 61 105 151 KAI9137837.1 40S ribosomal protein S13 [Paraphysoderma sedebokerense] diamond 1410 75.1 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Physodermatomycetes Physodermatales Physodermataceae Paraphysoderma Paraphysoderma sedebokerense
8983101 8983101 PRJEB3181_P_NODE_7208_length_312_cov_2.978648_g6947_i0 PRJEB3181 7208 312 2.978648 9.29338176 Fungi 4751 Fungi Fungi 91.3 2.58e-21   NR KAI9221418.1 64508 g6947 i0 58.1 16.7115384615385 74 31 71.2 0 5 226 37 110 KAI9221418.1 60S ribosomal protein L30 [Blastocladiella britannica] diamond 5214 91.3 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Blastocladiella Blastocladiella britannica
27507468 27507468 PRJEB3181_P_NODE_10263_length_265_cov_3.371795_g9999_i0 PRJEB3181 10263 265 3.371795 8.93525675 Blastocladiella britannica 64508 Fungi Fungi 65.5 1.41e-10   NR KAI9225051.1 64508 g9999 i0 53.8 0.588679245283019 52 24 58.9 0 238 83 51 102 KAI9225051.1 thioredoxin-like protein [Blastocladiella britannica] diamond 156 65.5 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Blastocladiella Blastocladiella britannica
27532306 27532306 PRJEB3181_P_NODE_4623_length_371_cov_9.823529_g4375_i0 PRJEB3181 4623 371 9.823529 36.44529259 Fungi 4751 Fungi Fungi 49.7 1.63e-4   NR ORZ29800.1 765915 g4375 i0 55.3 1.3099730458221 38 17 30.7 0 368 255 72 109 ORZ29800.1 Plectin/S10 domain-domain-containing protein, partial [Catenaria anguillulae PL171] diamond 486 49.7 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Catenariaceae Catenaria Catenaria anguillulae
27595620 27595620 PRJEB3181_P_NODE_23544_length_167_cov_1.544118_g23279_i0 PRJEB3181 23544 167 1.544118 2.57867706 Allomyces 28581 Fungi Fungi 68.6 5.69e-13   NR KAJ3364617.1 64504 g23279 i0 57.7 2.80239520958084 52 22 93.4 0 165 10 57 108 KAJ3364617.1 40S ribosomal protein S26 [Allomyces arbusculus] diamond 468 68.6 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Allomyces Allomyces arbusculus
30222796 30222796 PRJEB3181_P_NODE_1252_length_553_cov_6.136015_g1102_i0 PRJEB3181 1252 553 6.136015 33.93216295 Blastocladiella britannica 64508 Fungi Fungi 137 4.54e-38   NR KAI9222680.1 64508 g1102 i0 64.4 3.52079566003617 118 42 64 0 496 143 1 118 KAI9222680.1 translation protein SH3-like domain-containing protein, partial [Blastocladiella britannica] diamond 1947 137 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Blastocladiella Blastocladiella britannica
30911573 30911573 PRJEB3181_P_NODE_6094_length_334_cov_2.283828_g5837_i0 PRJEB3181 6094 334 2.283828 7.62798552 Eukaryota 2759 Fungi Fungi 113 8.93e-30   NR KAI9219101.1 64508 g5837 i0 64.2 12.7455089820359 95 34 85.3 0 2 286 33 127 KAI9219101.1 40S ribosomal protein S12, partial [Blastocladiella britannica] diamond 4257 113 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Blastocladiella Blastocladiella britannica

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;