contig_metadata
18 rows where bioproject = "PRJEB3181", tax_clade = "PVC group" and tax_phylum = "Verrucomicrobiota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 4816697 | 4816697 | PRJEB3181_P_NODE_26584_length_155_cov_3.233871_g26319_i0 | PRJEB3181 | 26584 | 155 | 3.233871 | 5.01250005 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 111 | 2.07e-20 | NTclustered | gi|2080888260|gb|CP080649.1| | 2866311 | g26319 | i0 | 86.869 | 11.7935483870968 | 99 | 13 | 64 | 0 | 50 | 148 | 2334180 | 2334082 | Ruficoccus sp. ZRK36 chromosome, complete genome | blastn | 1828 | 111 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Puniceicoccales | Cerasicoccaceae | Ruficoccus | Ruficoccus sp. ZRK36 | |
| 5158314 | 5158314 | PRJEB3181_P_NODE_27265_length_153_cov_2.401639_g27000_i0 | PRJEB3181 | 27265 | 153 | 2.401639 | 3.67450767 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 213 | 5.43e-51 | NTclustered | gi|2874253690|emb|OY969416.1| | 412056 | g27000 | i0 | 92.105 | 14.5882352941176 | 152 | 10 | 99 | 2 | 3 | 153 | 1316165 | 1316315 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD04967.bin.1.157 genome assembly, chromosome: 1 | blastn | 2232 | 213 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 5158532 | 5158532 | PRJEB3181_S_NODE_7025_length_235_cov_3.570000_g6732_i0 | PRJEB3181 | 7025 | 235 | 3.57 | 8.3895 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 196 | 9.19e-46 | NTclustered | gi|2874254065|emb|OY970130.1| | 412056 | g6732 | i0 | 82.667 | 6.69787234042553 | 225 | 35 | 95 | 4 | 5 | 227 | 5153513 | 5153735 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD05705.bin.c.1 genome assembly, chromosome: 1 | blastn | 1574 | 196 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 10258860 | 10258860 | PRJEB3181_S_NODE_2849_length_330_cov_11.569492_g2556_i0 | PRJEB3181 | 2849 | 330 | 11.569492 | 38.1793236 | Fontisphaera persica | 2974023 | Bacteria | Bacteria | 254 | 7.93e-63 | NTclustered | gi|2439237958|gb|CP116615.1| | 2974023 | g2556 | i0 | 83.883 | 151.481818181818 | 273 | 36 | 81 | 7 | 1 | 267 | 3861306 | 3861036 | Fontisphaera persica strain B-154 chromosome, complete genome | blastn | 49989 | 254 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Limisphaerales | Fontisphaeraceae | Fontisphaera | Fontisphaera persica | |
| 10258921 | 10258921 | PRJEB3181_S_NODE_7569_length_227_cov_19.265625_g7276_i0 | PRJEB3181 | 7569 | 227 | 19.265625 | 43.73296875 | Fontisphaera persica | 2974023 | Bacteria | Bacteria | 267 | 6.63e-67 | NTclustered | gi|2439237958|gb|CP116615.1| | 2974023 | g7276 | i0 | 87.931 | 196.449339207048 | 232 | 21 | 100 | 6 | 1 | 227 | 3861077 | 3861306 | Fontisphaera persica strain B-154 chromosome, complete genome | blastn | 44594 | 267 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Limisphaerales | Fontisphaeraceae | Fontisphaera | Fontisphaera persica | |
| 11192165 | 11192165 | PRJEB3181_P_NODE_15549_length_213_cov_1.593407_g15285_i0 | PRJEB3181 | 15549 | 213 | 1.593407 | 3.39395691 | Opitutus | 178440 | Bacteria | Bacteria | 180 | 8.24e-41 | NTclustered | gi|470483113|ref|NR_076574.1| | 107709 | g15285 | i0 | 85 | 5.69483568075117 | 180 | 24 | 84 | 3 | 19 | 196 | 1436 | 1258 | Opitutus terrae strain PB90-1 23S ribosomal RNA gene, complete sequence | blastn | 1213 | 180 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Opitutus | Opitutus terrae | |
| 14084183 | 14084183 | PRJEB3181_P_NODE_10632_length_260_cov_11.004367_g10368_i0 | PRJEB3181 | 10632 | 260 | 11.004367 | 28.6113542 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 211 | 3.69e-50 | NTclustered | gi|2874254096|emb|OY970179.1| | 412056 | g10368 | i0 | 84.332 | 246.796153846154 | 217 | 32 | 83 | 2 | 3 | 218 | 1729009 | 1729224 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD05521.bin.c.1 genome assembly, chromosome: 1 | blastn | 64167 | 211 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 15016666 | 15016666 | PRJEB3181_P_NODE_12692_length_237_cov_40.475728_g12428_i0 | PRJEB3181 | 12692 | 237 | 40.475728 | 95.92747536 | Opitutaceae | 134623 | Bacteria | Bacteria | 364 | 2.4099999999999998e-96 | NTclustered | gi|1070531674|gb|CP016094.1| | 1838286 | g12428 | i0 | 95.217 | 111.793248945148 | 230 | 11 | 97 | 0 | 1 | 230 | 2556424 | 2556195 | Lacunisphaera limnophila strain IG16b, complete genome | blastn | 26495 | 366 | 0.994535519125683 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Lacunisphaera | Lacunisphaera limnophila | |
| 16291509 | 16291509 | PRJEB3181_P_NODE_21953_length_174_cov_2.146853_g21688_i0 | PRJEB3181 | 21953 | 174 | 2.146853 | 3.73552422 | root | 1 | Root_unresolved | Root_unresolved | 228 | 2.2699999999999997e-55 | NTclustered | gi|183579829|emb|AM905426.1| | 320771 | g21688 | i0 | 92.994 | 266.965517241379 | 157 | 10 | 90 | 1 | 10 | 166 | 879 | 724 | Bacterium Ellin514 23S rRNA gene, isolate Ellin514 | blastn | 46452 | 230 | 0.991304347826087 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Pedosphaerae | Pedosphaerales | Pedosphaeraceae | Pedosphaera | Pedosphaera parvula | |
| 16632828 | 16632828 | PRJEB3181_P_NODE_19974_length_184_cov_1.718954_g19710_i0 | PRJEB3181 | 19974 | 184 | 1.718954 | 3.16287536 | Oleiharenicola sp. Vm1 | 3398393 | Bacteria | Bacteria | 324 | 3.01e-84 | NTclustered | gi|2912653302|gb|CP180537.1| | 3398393 | g19710 | i0 | 98.37 | 30.2282608695652 | 184 | 3 | 100 | 0 | 1 | 184 | 3557863 | 3558046 | Oleiharenicola sp. Vm1 chromosome, complete genome | blastn | 5562 | 324 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Oleiharenicola | Oleiharenicola sp. Vm1 | |
| 17907524 | 17907524 | PRJEB3181_P_NODE_14095_length_224_cov_20.564767_g13831_i0 | PRJEB3181 | 14095 | 224 | 20.564767 | 46.06507808 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 254 | 5.08e-63 | NTclustered | gi|2874253779|emb|OY969763.1| | 412056 | g13831 | i0 | 87.168 | 80.6830357142857 | 226 | 25 | 100 | 4 | 1 | 224 | 3833379 | 3833602 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD04967.bin.c.2 genome assembly, chromosome: 1 | blastn | 18073 | 254 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 17907577 | 17907577 | PRJEB3181_P_NODE_22575_length_171_cov_4.050000_g22310_i0 | PRJEB3181 | 22575 | 171 | 4.05 | 6.9255 | Opitutales bacterium | 2026772 | Bacteria | Bacteria | 143 | 8.26e-30 | NTclustered | gi|2891482117|emb|OZ219851.1| | 2026772 | g22310 | i0 | 88.525 | 17.8771929824561 | 122 | 8 | 70 | 6 | 1 | 119 | 1410121 | 1410239 | MAG: Opitutales bacterium isolate e4292735-b3b5-42df-bce3-ad3ef7a88f44 genome assembly, chromosome: 10 | blastn | 3057 | 143 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutales bacterium | |||
| 17907584 | 17907584 | PRJEB3181_P_NODE_24355_length_163_cov_5.204545_g24090_i0 | PRJEB3181 | 24355 | 163 | 5.204545 | 8.48340835 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 182 | 1.66e-41 | NTclustered | gi|2874254096|emb|OY970179.1| | 412056 | g24090 | i0 | 92.248 | 415.337423312883 | 129 | 9 | 80 | 1 | 4 | 131 | 1729233 | 1729105 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD05521.bin.c.1 genome assembly, chromosome: 1 | blastn | 67700 | 182 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 19181629 | 19181629 | PRJEB3181_S_NODE_7916_length_223_cov_7.260638_g7623_i0 | PRJEB3181 | 7916 | 223 | 7.260638 | 16.19122274 | Opitutales bacterium | 2026772 | Bacteria | Bacteria | 167 | 6.779999999999999e-37 | NTclustered | gi|2891482117|emb|OZ219851.1| | 2026772 | g7623 | i0 | 82.412 | 30.7982062780269 | 199 | 27 | 87 | 8 | 24 | 218 | 1410112 | 1410306 | MAG: Opitutales bacterium isolate e4292735-b3b5-42df-bce3-ad3ef7a88f44 genome assembly, chromosome: 10 | blastn | 6868 | 167 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutales bacterium | |||
| 20456808 | 20456808 | PRJEB3181_P_NODE_7697_length_303_cov_15.422794_g7435_i0 | PRJEB3181 | 7697 | 303 | 15.422794 | 46.73106582 | uncultured Verrucomicrobiota bacterium | 156588 | Bacteria | Bacteria | 510 | 3.87e-140 | NTclustered | gi|2442650069|gb|OQ422736.1| | 156588 | g7435 | i0 | 99.642 | 90.3927392739274 | 279 | 1 | 92 | 0 | 25 | 303 | 907 | 629 | Uncultured Verrucomicrobia bacterium clone KCM_4_1_112 16S ribosomal RNA gene, partial sequence | blastn | 27389 | 510 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | uncultured Verrucomicrobiota bacterium | |||||
| 23007928 | 23007928 | PRJEB3181_P_NODE_11419_length_251_cov_4.604545_g11155_i0 | PRJEB3181 | 11419 | 251 | 4.604545 | 11.55740795 | Verrucomicrobia bacterium IMCC26134 | 1637999 | Bacteria | Bacteria | 117 | 7.95e-22 | NTclustered | gi|807238858|gb|CP011265.1| | 1637999 | g11155 | i0 | 89.247 | 26.2589641434263 | 93 | 10 | 37 | 0 | 14 | 106 | 1904166 | 1904258 | Verrucomicrobia bacterium IMCC26134, complete genome | blastn | 6591 | 117 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobia bacterium IMCC26134 | |||||
| 23008178 | 23008178 | PRJEB3181_S_NODE_4719_length_276_cov_55.253112_g4426_i0 | PRJEB3181 | 4719 | 276 | 55.253112 | 152.49858912 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 268 | 2.3099999999999994e-67 | NTclustered | gi|2874253779|emb|OY969763.1| | 412056 | g4426 | i0 | 87.879 | 79.1521739130435 | 231 | 24 | 83 | 4 | 4 | 232 | 3833597 | 3833369 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD04967.bin.c.2 genome assembly, chromosome: 1 | blastn | 21846 | 268 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 32246595 | 32246595 | PRJEB3181_S_NODE_6178_length_248_cov_3.981221_g5885_i0 | PRJEB3181 | 6178 | 248 | 3.981221 | 9.87342808 | Verrucomicrobiota bacterium | 2026799 | Bacteria | Bacteria | 83.2 | 2.32e-16 | NR | MBS0645922.1 | 2026799 | g5885 | i0 | 50.6 | 1.86290322580645 | 77 | 38 | 93.1 | 0 | 17 | 247 | 766 | 842 | MBS0645922.1 hypothetical protein [Verrucomicrobiota bacterium] | diamond | 462 | 83.2 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;