RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJEB3181", tax_clade = "Metamonada" and tax_phylum = "Preaxostyla"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Preaxostyla · 3 ✖

tax_clade 1

  • Metamonada · 3 ✖

bioproject 1

  • PRJEB3181 · 3 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1330258 1330258 PRJEB3181_P_NODE_21742_length_175_cov_1.777778_g21477_i0 PRJEB3181 21742 175 1.777778 3.1111115 Monocercomonoides exilis 2049356 Preaxostyla other_Eukaryota 52.8 0.015   NTclustered gi|2794973889|ref|XM_067874884.1| 2049356 g21477 i0 100 0.32 28 0 16 0 102 129 8055 8082 Monocercomonoides exilis uncharacterized protein (MONOS_4785), partial mRNA blastn 56 52.8 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Polymastigidae Monocercomonoides Monocercomonoides exilis
30412747 30412747 PRJEB3181_P_NODE_1333_length_544_cov_27.278752_g1178_i0 PRJEB3181 1333 544 27.278752 148.39641088 Streblomastix strix 222440 Preaxostyla other_Eukaryota 51.2 5.08e-4   NR KAA6397625.1 222440 g1178 i0 61.9 0.231617647058824 42 15 23.2 1 111 236 41 81 KAA6397625.1 MAG: hypothetical protein EZS28_006852 [Streblomastix strix] diamond 126 51.2 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Streblomastigidae Streblomastix Streblomastix strix
32404537 32404537 PRJEB3181_P_NODE_8419_length_291_cov_6.838462_g8156_i0 PRJEB3181 8419 291 6.838462 19.89992442 Monocercomonoides exilis 2049356 Preaxostyla other_Eukaryota 53.5 8.85e-6   NR XP_067719024.1 2049356 g8156 i0 39.7 0.649484536082474 63 37 64.9 1 289 101 5 66 XP_067719024.1 uncharacterized protein MONOS_12211 [Monocercomonoides exilis] diamond 189 53.5 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Polymastigidae Monocercomonoides Monocercomonoides exilis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;