RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJEB3181" and tax_clade = "Candidatus Thermofonsia Clade 3"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Candidatus Thermofonsia Clade 3 · 4 ✖

bioproject 1

  • PRJEB3181 · 4 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3882020 3882020 PRJEB3181_P_NODE_10284_length_264_cov_51.201717_g10020_i0 PRJEB3181 10284 264 51.201717 135.17253288 Candidatus Roseilinea sp. 2838777 Bacteria Bacteria 122 1.81e-23   NTclustered gi|2314722916|dbj|AP024676.1| 2838777 g10020 i0 75.889 28.8712121212121 253 54 95 6 14 263 3494886 3494638 MAG: Candidatus Roseilinea sp. KatS3mg053 DNA, complete genome blastn 7622 122 1 Bacteria Candidatus Thermofonsia Clade 3 Bacillati Chloroflexota Candidatus Thermofontia     Candidatus Roseilinea Candidatus Roseilinea sp.
3882106 3882106 PRJEB3181_P_NODE_5364_length_351_cov_7.187500_g5112_i0 PRJEB3181 5364 351 7.1875 25.228125 Candidatus Roseilinea sp. 2838777 Bacteria Bacteria 315 3.8299999999999997e-81   NTclustered gi|2314722916|dbj|AP024676.1| 2838777 g5112 i0 85.714 11.5954415954416 301 40 85 3 1 299 3495922 3495623 MAG: Candidatus Roseilinea sp. KatS3mg053 DNA, complete genome blastn 4070 315 1 Bacteria Candidatus Thermofonsia Clade 3 Bacillati Chloroflexota Candidatus Thermofontia     Candidatus Roseilinea Candidatus Roseilinea sp.
11534372 11534372 PRJEB3181_S_NODE_810_length_502_cov_17.980728_g545_i0 PRJEB3181 810 502 17.980728 90.26325456 Candidatus Roseilinea sp. 2838777 Bacteria Bacteria 292 2.66e-74   NTclustered gi|2314722916|dbj|AP024676.1| 2838777 g545 i0 77.711 105.147410358566 498 98 98 12 1 492 3494394 3494884 MAG: Candidatus Roseilinea sp. KatS3mg053 DNA, complete genome blastn 52784 292 1 Bacteria Candidatus Thermofonsia Clade 3 Bacillati Chloroflexota Candidatus Thermofontia     Candidatus Roseilinea Candidatus Roseilinea sp.
24281866 24281866 PRJEB3181_S_NODE_16060_length_162_cov_2.362205_g15767_i0 PRJEB3181 16060 162 2.362205 3.8267721 Candidatus Roseilinea sp. 2838777 Bacteria Bacteria 158 2.78e-34   NTclustered gi|2314722916|dbj|AP024676.1| 2838777 g15767 i0 89.516 8.41975308641975 124 13 77 0 1 124 3495746 3495623 MAG: Candidatus Roseilinea sp. KatS3mg053 DNA, complete genome blastn 1364 158 1 Bacteria Candidatus Thermofonsia Clade 3 Bacillati Chloroflexota Candidatus Thermofontia     Candidatus Roseilinea Candidatus Roseilinea sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;