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contig_metadata

33 rows where bioproject = "PRJEB3181" and tax_clade = "Bacteria candidate phyla"

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analysis 2

tax_superkingdom 1

tax_clade 1

  • Bacteria candidate phyla · 33 ✖

bioproject 1

  • PRJEB3181 · 33 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1330359 1330359 PRJEB3181_S_NODE_1482_length_408_cov_662.780161_g1194_i0 PRJEB3181 1482 408 662.780161 2704.14305688 Minisyncoccota bacterium 2053589 Bacteria Bacteria 195 3.15e-61   NR MFA6050691.1 2053589 g1194 i0 81.1 0.933823529411765 127 24 93.4 0 3 383 41 167 MFA6050691.1 50S ribosomal protein L10 [Candidatus Paceibacterota bacterium] diamond 381 195 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
1330384 1330384 PRJEB3181_S_NODE_17542_length_155_cov_2.258333_g17249_i0 PRJEB3181 17542 155 2.258333 3.50041615 Patescibacteria group bacterium 2052139 Bacteria Bacteria 115 1.6e-21   NTclustered gi|2621785934|emb|OY782392.1| 2052139 g17249 i0 82.443 0.845161290322581 131 23 85 0 25 155 548040 547910 MAG: Patescibacteria group bacterium isolate 573f42cd-6ce4-4b95-a45b-0ed028197a55 genome assembly, chromosome: 1 blastn 131 115 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium
3539409 3539409 PRJEB3181_S_NODE_1643_length_396_cov_191.354571_g1353_i0 PRJEB3181 1643 396 191.354571 757.76410116 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 203 1.17e-62   NR MDP5038939.1 2044595 g1353 i0 84.7 0.893939393939394 118 18 89.4 0 2 355 104 221 MDP5038939.1 FAD-dependent oxidoreductase [Candidatus Altimarinota bacterium] diamond 354 203 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
6434150 6434150 PRJEB3181_P_NODE_22146_length_173_cov_2.845070_g21881_i0 PRJEB3181 22146 173 2.84507 4.9219711 Patescibacteria group bacterium 2052139 Bacteria Bacteria 57 1.44e-8   NR MCL4419683.1 2052139 g21881 i0 65.7 0.606936416184971 35 12 60.7 0 173 69 81 115 MCL4419683.1 C1 family peptidase [Patescibacteria group bacterium] diamond 105 57 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium
8983051 8983051 PRJEB3181_P_NODE_20708_length_180_cov_1.597315_g20444_i0 PRJEB3181 20708 180 1.597315 2.875167 Candidatus Methylomirabilis oxygeniifera 671143 Bacteria Bacteria 75 3.26e-9   NTclustered gi|507148395|ref|NR_103198.1| 671143 g20444 i0 83.133 6.23333333333333 83 12 46 2 12 93 532 451 Candidatus Methylomirabilis oxyfera 23S ribosomal RNA gene, complete sequence blastn 1122 75 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota Candidatus Methylomirabilia Candidatus Methylomirabilales Candidatus Methylomirabilaceae Candidatus Methylomirabilis Candidatus Methylomirabilis oxygeniifera
8983130 8983130 PRJEB3181_S_NODE_11088_length_192_cov_1122.541401_g10795_i0 PRJEB3181 11088 192 1122.541401 2155.27948992 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 66.2 4.9e-12   NR MDD2745665.1 2044595 g10795 i0 63.8 0.734375 47 17 73.4 0 189 49 9 55 MDD2745665.1 hypothetical protein [Candidatus Altimarinota bacterium] diamond 141 66.2 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
12809433 12809433 PRJEB3181_P_NODE_10451_length_262_cov_9.640693_g10187_i0 PRJEB3181 10451 262 9.640693 25.25861566 Candidatus Aminicenantes bacterium 2052149 Bacteria Bacteria 307 4.62e-79   NTclustered gi|2874253756|emb|OY969696.1| 2052149 g10187 i0 87.732 111.354961832061 269 25 100 5 1 262 971479 971212 MAG: Candidatus Aminicenantes bacterium isolate MFD04408.bin.1.14 genome assembly, chromosome: 1 blastn 29175 307 1 Bacteria Bacteria candidate phyla   Candidatus Aminicenantota         Candidatus Aminicenantes bacterium
14084358 14084358 PRJEB3181_S_NODE_15632_length_164_cov_2.031008_g15339_i0 PRJEB3181 15632 164 2.031008 3.33085312 candidate division SR1 bacterium RAAC1_SR1_1 1394709 Bacteria Bacteria 89.8 1.04e-13   NTclustered gi|563351663|gb|CP006913.1| 1394709 g15339 i0 79.562 3.8109756097561 137 19 80 9 18 148 125175 125042 Candidate division SR1 bacterium RAAC1_SR1_1 chromosome, complete genome blastn 625 89.8 1 Bacteria Bacteria candidate phyla   Candidatus Absconditibacteriota         candidate division SR1 bacterium RAAC1_SR1_1
19181397 19181397 PRJEB3181_P_NODE_18236_length_194_cov_1.380368_g17972_i0 PRJEB3181 18236 194 1.380368 2.67791392 Patescibacteria group bacterium 2052139 Bacteria Bacteria 85.1 2.1e-17   NR TXG76615.1 2052139 g17972 i0 75 1.77835051546392 60 15 92.8 0 192 13 134 193 TXG76615.1 MAG: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase [Patescibacteria group bacterium] diamond 345 85.1 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium
26684994 26684994 PRJEB3181_S_NODE_15281_length_166_cov_2.419847_g14988_i0 PRJEB3181 15281 166 2.419847 4.01694602 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 67.8 1.94e-11   NR MDD3719737.1 2044595 g14988 i0 81.1 5.34939759036145 37 7 66.9 0 55 165 148 184 MDD3719737.1 ATP-dependent zinc metalloprotease FtsH [Candidatus Altimarinota bacterium] diamond 888 67.8 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
26906763 26906763 PRJEB3181_S_NODE_12102_length_185_cov_2.813333_g11809_i0 PRJEB3181 12102 185 2.813333 5.20466605 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 104 1.2099999999999999e-24   NR MCT4617083.1 2044595 g11809 i0 85.2 0.989189189189189 61 9 98.9 0 184 2 244 304 MCT4617083.1 GspE/PulE family protein [Candidatus Altimarinota bacterium] diamond 183 104 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
26969883 26969883 PRJEB3181_P_NODE_11262_length_253_cov_3.824324_g10998_i0 PRJEB3181 11262 253 3.824324 9.67553972 Candidatus Dependentiae bacterium 2030827 Bacteria Bacteria 70.5 1.01e-13   NR RTL06915.1 2030827 g10998 i0 69 0.49802371541502 42 13 49.8 0 2 127 41 82 RTL06915.1 MAG: hypothetical protein EKK58_03725 [Candidatus Dependentiae bacterium] diamond 126 70.5 1 Bacteria Bacteria candidate phyla             Candidatus Babelota bacterium
27381152 27381152 PRJEB3181_S_NODE_11023_length_193_cov_2.025316_g10730_i0 PRJEB3181 11023 193 2.025316 3.90885988 Candidatus Curtissbacteria bacterium 2750075 Bacteria Bacteria 96.7 1.13e-21   NR MBP6980007.1 2750075 g10730 i0 100 0.699481865284974 45 0 69.9 0 193 59 378 422 MBP6980007.1 hypothetical protein [Candidatus Curtissbacteria bacterium] diamond 135 96.7 1 Bacteria Bacteria candidate phyla   Candidatus Curtissiibacteriota         Candidatus Curtissbacteria bacterium
27570397 27570397 PRJEB3181_S_NODE_9764_length_203_cov_3.232143_g9471_i0 PRJEB3181 9764 203 3.232143 6.56125029 Candidatus Curtissbacteria bacterium 2750075 Bacteria Bacteria 120 1.09e-33   NR MBP6980006.1 2750075 g9471 i0 100 0.931034482758621 63 0 93.1 0 2 190 32 94 MBP6980006.1 nucleotidyltransferase domain-containing protein [Candidatus Curtissbacteria bacterium] diamond 189 120 1 Bacteria Bacteria candidate phyla   Candidatus Curtissiibacteriota         Candidatus Curtissbacteria bacterium
27980956 27980956 PRJEB3181_S_NODE_12365_length_183_cov_3.040541_g12072_i0 PRJEB3181 12365 183 3.040541 5.56419003 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 51.6 1.27e-5   NR MBC7498541.1 2044595 g12072 i0 54.1 2.42622950819672 37 17 60.7 0 183 73 155 191 MBC7498541.1 glucosaminidase domain-containing protein [Candidatus Altimarinota bacterium] diamond 444 51.6 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
28201702 28201702 PRJEB3181_P_NODE_1286_length_549_cov_5.359073_g1133_i0 PRJEB3181 1286 549 5.359073 29.42131077 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 123 4.05e-32   NR MDD2745281.1 2044595 g1133 i0 57.7 0.60655737704918 111 47 60.7 0 528 196 1 111 MDD2745281.1 hypothetical protein [Candidatus Altimarinota bacterium] diamond 333 123 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
28517739 28517739 PRJEB3181_S_NODE_8087_length_221_cov_2.935484_g7794_i0 PRJEB3181 8087 221 2.935484 6.48741964 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 94.4 1.37e-20   NR NVP18040.1 2044595 g7794 i0 67.1 1.98190045248869 73 24 99.1 0 220 2 338 410 NVP18040.1 aldehyde dehydrogenase family protein [Candidatus Altimarinota bacterium] diamond 438 94.4 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
28549437 28549437 PRJEB3181_S_NODE_14547_length_170_cov_1.140741_g14254_i0 PRJEB3181 14547 170 1.140741 1.9392597 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 73.6 1.87e-13   NR MDD5769614.1 2044595 g14254 i0 80.5 0.723529411764706 41 8 72.4 0 39 161 474 514 MDD5769614.1 DEAD/DEAH box helicase [Candidatus Altimarinota bacterium] diamond 123 73.6 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
28953400 28953400 PRJEB3181_P_NODE_14168_length_224_cov_2.880829_g13904_i0 PRJEB3181 14168 224 2.880829 6.45305696 Bacteria 2 Bacteria Bacteria 42.7 0.0285   NR OGY24838.1 1802595 g13904 i0 34.7 1.92857142857143 72 45 93.8 1 13 222 215 286 OGY24838.1 MAG: hypothetical protein A2134_01570 [Candidatus Woykebacteria bacterium RBG_16_39_9b] diamond 432 42.7 1 Bacteria Bacteria candidate phyla   Candidatus Woykeibacteriota         Candidatus Woykebacteria bacterium RBG_16_39_9b
29496443 29496443 PRJEB3181_S_NODE_7870_length_224_cov_2.000000_g7577_i0 PRJEB3181 7870 224 2 4.48 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 48.9 5.17e-5   NR MDD3793229.1 2044595 g7577 i0 58.7 1.3125 46 13 53.6 1 224 105 84 129 MDD3793229.1 large conductance mechanosensitive channel protein MscL [Candidatus Altimarinota bacterium] diamond 294 48.9 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
29748745 29748745 PRJEB3181_P_NODE_24511_length_163_cov_1.462121_g24246_i0 PRJEB3181 24511 163 1.462121 2.38325723 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 75.5 2.33e-15   NR MDD2745084.1 2044595 g24246 i0 71.2 5.74233128834356 52 15 95.7 0 5 160 75 126 MDD2745084.1 hypothetical protein [Candidatus Altimarinota bacterium] diamond 936 75.5 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
30222809 30222809 PRJEB3181_S_NODE_4472_length_282_cov_7.854251_g4179_i0 PRJEB3181 4472 282 7.854251 22.14898782 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 100 1e-22   NR MCD5383053.1 2044595 g4179 i0 64.7 1.4468085106383 68 24 72.3 0 36 239 350 417 MCD5383053.1 Glu/Leu/Phe/Val dehydrogenase [Candidatus Altimarinota bacterium] diamond 408 100 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
30286490 30286490 PRJEB3181_P_NODE_26652_length_155_cov_2.088710_g26387_i0 PRJEB3181 26652 155 2.08871 3.2375005 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 61.2 3.31e-9   NR MDD2744996.1 2044595 g26387 i0 62.7 0.987096774193548 51 19 98.7 0 155 3 230 280 MDD2744996.1 protein translocase subunit SecD [Candidatus Altimarinota bacterium] diamond 153 61.2 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
30286491 30286491 PRJEB3181_P_NODE_27952_length_151_cov_1.641667_g27687_i0 PRJEB3181 27952 151 1.641667 2.47891717 Patescibacteria group bacterium 2052139 Bacteria Bacteria 44.3 9.56e-4   NR MCL4420037.1 2052139 g27687 i0 52.6 0.754966887417219 38 18 75.5 0 149 36 53 90 MCL4420037.1 hypothetical protein [Patescibacteria group bacterium] diamond 114 44.3 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium
30475753 30475753 PRJEB3181_P_NODE_16193_length_208_cov_2.276836_g15929_i0 PRJEB3181 16193 208 2.276836 4.73581888 Patescibacteria group bacterium 2052139 Bacteria Bacteria 69.7 6.73e-12   NR MDQ1343359.1 2052139 g15929 i0 65.7 0.966346153846154 67 19 95.2 3 208 11 315 378 MDQ1343359.1 hypothetical protein [Patescibacteria group bacterium] diamond 201 69.7 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium
30696700 30696700 PRJEB3181_S_NODE_16734_length_159_cov_0.967742_g16441_i0 PRJEB3181 16734 159 0.967742 1.53870978 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 68.9 1.6e-12   NR MDP5038906.1 2044595 g16441 i0 69.2 0.981132075471698 52 16 98.1 0 157 2 70 121 MDP5038906.1 30S ribosomal protein S3 [Candidatus Altimarinota bacterium] diamond 156 68.9 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
30949734 30949734 PRJEB3181_S_NODE_4794_length_274_cov_2.640167_g4501_i0 PRJEB3181 4794 274 2.640167 7.23405758 Candidatus Curtissbacteria bacterium 2750075 Bacteria Bacteria 171 2.68e-49   NR MBP6980007.1 2750075 g4501 i0 100 0.996350364963504 91 0 99.6 0 274 2 293 383 MBP6980007.1 hypothetical protein [Candidatus Curtissbacteria bacterium] diamond 273 171 1 Bacteria Bacteria candidate phyla   Candidatus Curtissiibacteriota         Candidatus Curtissbacteria bacterium
31582048 31582048 PRJEB3181_S_NODE_15336_length_166_cov_1.404580_g15043_i0 PRJEB3181 15336 166 1.40458 2.3316028 Patescibacteria group bacterium 2052139 Bacteria Bacteria 90.1 2.67e-19   NR MCL4419431.1 2052139 g15043 i0 85.1 0.849397590361446 47 6 83.1 1 2 139 541 587 MCL4419431.1 hypothetical protein [Patescibacteria group bacterium] diamond 141 90.1 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium
31739876 31739876 PRJEB3181_P_NODE_16877_length_203_cov_1.691860_g16613_i0 PRJEB3181 16877 203 1.69186 3.4344758 Patescibacteria group bacterium 2052139 Bacteria Bacteria 57.4 1.49e-7   NR MDQ1343779.1 2052139 g16613 i0 40.6 3.08866995073892 69 39 99 1 3 203 300 368 MDQ1343779.1 hypothetical protein [Patescibacteria group bacterium] diamond 627 57.4 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium
31803156 31803156 PRJEB3181_P_NODE_26817_length_154_cov_8.292683_g26552_i0 PRJEB3181 26817 154 8.292683 12.77073182 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 55.8 3.39e-8   NR MDD2745665.1 2044595 g26552 i0 63.2 3.52597402597403 38 14 74 0 2 115 3 40 MDD2745665.1 hypothetical protein [Candidatus Altimarinota bacterium] diamond 543 55.8 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
32056382 32056382 PRJEB3181_S_NODE_6358_length_245_cov_5.771429_g6065_i0 PRJEB3181 6358 245 5.771429 14.14000105 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 112 1.1000000000000002e-28   NR MDD5769335.1 2044595 g6065 i0 80.6 0.820408163265306 67 13 82 0 244 44 105 171 MDD5769335.1 S24 family peptidase [Candidatus Altimarinota bacterium] diamond 201 112 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
32372989 32372989 PRJEB3181_S_NODE_5099_length_267_cov_1.603448_g4806_i0 PRJEB3181 5099 267 1.603448 4.28120616 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 67.8 7.65e-11   NR MDA9129071.1 2044595 g4806 i0 54.7 1.47191011235955 64 28 71.9 1 204 13 75 137 MDA9129071.1 ferredoxin [Candidatus Altimarinota bacterium] diamond 393 67.8 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
32720160 32720160 PRJEB3181_S_NODE_4880_length_272_cov_2.987342_g4587_i0 PRJEB3181 4880 272 2.987342 8.12557024 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 99 1.27e-22   NR MDD3302104.1 2044595 g4587 i0 57.8 0.992647058823529 90 36 99.3 1 2 271 78 165 MDD3302104.1 hypothetical protein [Candidatus Altimarinota bacterium] diamond 270 99 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;