RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJEB30004" and tax_phylum = "Minisyncoccota"

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tax_superkingdom 1

tax_phylum 1

  • Minisyncoccota · 2 ✖

tax_clade 1

bioproject 1

  • PRJEB30004 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
12796537 12796537 PRJEB30004_P_NODE_449671_length_207_cov_3.113095_g434044_i0 PRJEB30004 449671 207 3.113095 6.44410665 Minisyncoccota bacterium 2053589 Bacteria Bacteria 132 3.38e-35   NR HVX91236.1 2053589 g434044 i0 91.2 3.94202898550725 68 6 98.6 0 2 205 188 255 HVX91236.1 IS3 family transposase [Candidatus Paceibacterota bacterium] diamond 816 132 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
31480765 31480765 PRJEB30004_P_NODE_157256_length_451_cov_3.174757_g141674_i0 PRJEB30004 157256 451 3.174757 14.31815407 Pseudomonadati 3379134 Bacteria Bacteria 180 2.33e-52   NR HVX91236.1 2053589 g141674 i0 82.5 2.72727272727273 103 16 67.2 1 450 148 259 361 HVX91236.1 IS3 family transposase [Candidatus Paceibacterota bacterium] diamond 1230 180 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;