RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJEB30004" and tax_phylum = "Candidatus Lloydiibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Lloydiibacteriota · 1 ✖

tax_clade 1

bioproject 1

  • PRJEB30004 · 1 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26780165 26780165 PRJEB30004_P_NODE_132441_length_512_cov_1.852008_g116962_i0 PRJEB30004 132441 512 1.852008 9.48228096 Candidatus Lloydbacteria bacterium RIFCSPHIGHO2_ 2750077 Bacteria Bacteria 167 6.98e-47   NR OGZ12757.1 1798663 g116962 i0 47.3 1.951171875 167 88 97.9 0 10 510 40 206 OGZ12757.1 MAG: hypothetical protein A3D67_02890 [Candidatus Lloydbacteria bacterium RIFCSPHIGHO2_02_FULL_51_22] diamond 999 167 1 Bacteria Bacteria candidate phyla   Candidatus Lloydiibacteriota         Candidatus Lloydbacteria bacterium RIFCSPHIGHO2_02_FULL_51_22

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;