contig_metadata
7 rows where bioproject = "PRJEB30004" and tax_phylum = "Bdellovibrionota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 988667 | 988667 | PRJEB30004_P_NODE_535881_length_182_cov_1.027972_g520254_i0 | PRJEB30004 | 535881 | 182 | 1.027972 | 1.87090904 | Pseudobdellovibrio | 2862745 | Bacteria | Bacteria | 152 | 1.4799999999999998e-32 | NTclustered | gi|507148233|ref|NR_103040.1| | 453816 | g520254 | i0 | 81.868 | 86.7692307692308 | 182 | 31 | 100 | 2 | 1 | 182 | 1337 | 1158 | Bdellovibrio exovorus strain JSS 23S ribosomal RNA gene, complete sequence | blastn | 15792 | 152 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Pseudobdellovibrio | Pseudobdellovibrio exovorus | ||
| 3871445 | 3871445 | PRJEB30004_P_NODE_497084_length_192_cov_2.143791_g481457_i0 | PRJEB30004 | 497084 | 192 | 2.143791 | 4.11607872 | Bdellovibrio sp. HCB337 | 3394358 | Bacteria | Bacteria | 272 | 1.1699999999999999e-68 | NTclustered | gi|2895525383|gb|CP178621.1| | 3394358 | g481457 | i0 | 92.188 | 257.677083333333 | 192 | 15 | 100 | 0 | 1 | 192 | 3448015 | 3447824 | Bdellovibrio sp. HCB337 chromosome, complete genome | blastn | 49474 | 272 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio sp. HCB337 | ||
| 6417400 | 6417400 | PRJEB30004_P_NODE_369826_length_241_cov_1.698020_g354199_i0 | PRJEB30004 | 369826 | 241 | 1.69802 | 4.0922282 | Peredibacter starrii | 28202 | Bacteria | Bacteria | 420 | 5.16e-113 | NTclustered | gi|2631252187|gb|CP139487.1| | 28202 | g354199 | i0 | 98.326 | 135.228215767635 | 239 | 4 | 99 | 0 | 3 | 241 | 512537 | 512299 | Peredibacter starrii strain A3.12 chromosome, complete genome | blastn | 32590 | 420 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Peredibacter | Peredibacter starrii | ||
| 12787093 | 12787093 | PRJEB30004_P_NODE_250311_length_322_cov_1.208481_g234684_i0 | PRJEB30004 | 250311 | 322 | 1.208481 | 3.89130882 | Bdellovibrio sp. HCB337 | 3394358 | Bacteria | Bacteria | 363 | 1.23e-95 | NTclustered | gi|2895525383|gb|CP178621.1| | 3394358 | g234684 | i0 | 87.156 | 137.422360248447 | 327 | 32 | 100 | 10 | 1 | 322 | 3446858 | 3447179 | Bdellovibrio sp. HCB337 chromosome, complete genome | blastn | 44250 | 363 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio sp. HCB337 | ||
| 15016495 | 15016495 | PRJEB30004_P_NODE_505072_length_190_cov_1.596026_g489445_i0 | PRJEB30004 | 505072 | 190 | 1.596026 | 3.0324494 | Pseudobdellovibrionaceae | 213483 | Bacteria | Bacteria | 296 | 6.83e-76 | NTclustered | gi|2800924434|gb|CP168967.1| | 959 | g489445 | i0 | 94.737 | 88.4315789473684 | 190 | 10 | 100 | 0 | 1 | 190 | 784502 | 784313 | Bdellovibrio bacteriovorus strain Bd4 chromosome, complete genome | blastn | 16802 | 296 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio bacteriovorus | ||
| 18840372 | 18840372 | PRJEB30004_P_NODE_607235_length_165_cov_1.928571_g591608_i0 | PRJEB30004 | 607235 | 165 | 1.928571 | 3.18214215 | Peredibacter | 263370 | Bacteria | Bacteria | 289 | 9.66e-74 | NTclustered | gi|2631252187|gb|CP139487.1| | 28202 | g591608 | i0 | 98.182 | 62.4484848484848 | 165 | 3 | 100 | 0 | 1 | 165 | 513572 | 513408 | Peredibacter starrii strain A3.12 chromosome, complete genome | blastn | 10304 | 289 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Peredibacter | Peredibacter starrii | ||
| 24274408 | 24274408 | PRJEB30004_P_NODE_566400_length_174_cov_1.666667_g550773_i0 | PRJEB30004 | 566400 | 174 | 1.666667 | 2.90000058 | Peredibacter starrii | 28202 | Bacteria | Bacteria | 276 | 7.980000000000001e-70 | NTclustered | gi|2631252187|gb|CP139487.1| | 28202 | g550773 | i0 | 95.402 | 4.90804597701149 | 174 | 7 | 100 | 1 | 1 | 174 | 512271 | 512099 | Peredibacter starrii strain A3.12 chromosome, complete genome | blastn | 854 | 276 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Peredibacter | Peredibacter starrii |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;