RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJEB30004", tax_kingdom = "Bacillati" and tax_phylum = "Candidatus Dormiibacterota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Dormiibacterota · 3 ✖

tax_kingdom 1

  • Bacillati · 3 ✖

bioproject 1

  • PRJEB30004 · 3 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27728672 27728672 PRJEB30004_P_NODE_648144_length_157_cov_1.830508_g632517_i0 PRJEB30004 648144 157 1.830508 2.87389756 Candidatus Dormiibacterota bacterium 2052315 Bacteria Bacteria 94 4.6800000000000005e-21   NR HYL71076.1 2052315 g632517 i0 80.4 0.974522292993631 51 10 97.5 0 153 1 47 97 HYL71076.1 hypothetical protein [Candidatus Dormiibacterota bacterium] diamond 153 94 1 Bacteria   Bacillati Candidatus Dormiibacterota         Candidatus Dormiibacterota bacterium
28549404 28549404 PRJEB30004_P_NODE_423107_length_217_cov_2.426966_g407480_i0 PRJEB30004 423107 217 2.426966 5.26651622 Candidatus Dormiibacterota bacterium 2052315 Bacteria Bacteria 54.7 7.56e-7   NR HYR78635.1 2052315 g407480 i0 47.3 0.76036866359447 55 28 76 1 48 212 30 83 HYR78635.1 hypothetical protein [Candidatus Dormiibacterota bacterium] diamond 165 54.7 1 Bacteria   Bacillati Candidatus Dormiibacterota         Candidatus Dormiibacterota bacterium
31038121 31038121 PRJEB30004_P_NODE_327055_length_264_cov_2.191111_g311428_i0 PRJEB30004 327055 264 2.191111 5.78453304 Bacteria 2 Bacteria Bacteria 157 6.309999999999998e-43   NR HZC65501.1 2052315 g311428 i0 80.2 1.96590909090909 86 17 97.7 0 264 7 452 537 HZC65501.1 multicopper oxidase domain-containing protein [Candidatus Dormiibacterota bacterium] diamond 519 158 0.993670886075949 Bacteria   Bacillati Candidatus Dormiibacterota         Candidatus Dormiibacterota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;