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contig_metadata

23 rows where bioproject = "PRJEB30004" and tax_clade = "Sar"

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analysis 2

tax_superkingdom 1

tax_clade 1

  • Sar · 23 ✖

bioproject 1

  • PRJEB30004 · 23 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
48970 48970 PRJEB30004_P_NODE_573341_length_172_cov_3.962406_g557714_i0 PRJEB30004 573341 172 3.962406 6.81533832 Saprolegnia parasitica 101203 SAR_Eukaryotes SAR_Eukaryotes 213 6.25e-51   NTclustered gi|813199067|ref|XR_001099866.1| 695850 g557714 i0 89.474 35.703488372093 171 14 98 4 4 172 1665 1497 Saprolegnia parasitica CBS 223.65 28S ribosomal RNA rRNA blastn 6141 213 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Saprolegniaceae Saprolegnia Saprolegnia parasitica
1321104 1321104 PRJEB30004_P_NODE_528562_length_183_cov_3.236111_g512935_i0 PRJEB30004 528562 183 3.236111 5.92208313 Sellaphora blackfordensis 433383 SAR_Eukaryotes SAR_Eukaryotes 193 8.8e-45   NTclustered gi|1829658070|gb|MN319622.1| 433383 g512935 i0 89.865 67.0491803278689 148 15 81 0 1 148 285 432 Sellaphora blackfordensis voucher (Bfp04)02 28S ribosomal RNA gene, partial sequence blastn 12270 193 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Naviculales Sellaphoraceae Sellaphora Sellaphora blackfordensis
2263999 2263999 PRJEB30004_P_NODE_596262_length_167_cov_2.882812_g580635_i0 PRJEB30004 596262 167 2.882812 4.81429604 Thalassiosirales 33847 SAR_Eukaryotes SAR_Eukaryotes 303 3.5e-78   NTclustered gi|2739942923|dbj|LC814783.1| 41457 g580635 i0 99.401 197.928143712575 167 1 100 0 1 167 4647 4481 Skeletonema pseudocostatum NIES-2843 chloroplast DNA, complete genome blastn 33054 303 1 Eukaryota Sar   Bacillariophyta Coscinodiscophyceae Thalassiosirales Skeletonemataceae Skeletonema Skeletonema pseudocostatum
2587915 2587915 PRJEB30004_P_NODE_343623_length_255_cov_1.138889_g327996_i0 PRJEB30004 343623 255 1.138889 2.90416695 Chlorarachniophyceae sp. P329 467061 SAR_Eukaryotes SAR_Eukaryotes 60.2 1.38e-4   NTclustered gi|220983374|dbj|AB453010.1| 467061 g327996 i0 100 11.5294117647059 32 0 13 0 202 233 1624 1593 Chlorarachniophyceae sp. P329 gene for nuclear large subunit ribosomal RNA, partial sequence blastn 2940 60.2 1 Eukaryota Sar   Cercozoa Chlorarachniophyceae       Chlorarachniophyceae sp. P329
6409741 6409741 PRJEB30004_P_NODE_206006_length_370_cov_3.157100_g190380_i0 PRJEB30004 206006 370 3.1571 11.68127 Vorticella sp. 1 2979179 SAR_Eukaryotes SAR_Eukaryotes 647 0   NTclustered gi|2304601489|gb|OP458310.1| 2979179 g190380 i0 99.717 88.9378378378378 353 1 95 0 18 370 1839 1487 Vorticella sp. 1 large subunit ribosomal RNA gene, partial sequence blastn 32907 647 1 Eukaryota Sar   Ciliophora Oligohymenophorea Sessilida Vorticellidae Vorticella Vorticella sp. 1
8978014 8978014 PRJEB30004_P_NODE_613608_length_164_cov_1.312000_g597981_i0 PRJEB30004 613608 164 1.312 2.15168 Schizostauron trachyderma 2770866 SAR_Eukaryotes SAR_Eukaryotes 60.2 8.18e-5   NTclustered gi|2125739626|gb|MZ520767.1| 2770866 g597981 i0 97.143 1.32317073170732 35 1 21 0 103 137 16520 16486 Schizostauron trachyderma strain SZCZE1420 mitochondrion, complete genome blastn 217 60.2 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Naviculales Stauroneidaceae Schizostauron Schizostauron trachyderma
9916708 9916708 PRJEB30004_P_NODE_258228_length_314_cov_2.709091_g242601_i0 PRJEB30004 258228 314 2.709091 8.50654574 Chilodonella 151076 SAR_Eukaryotes SAR_Eukaryotes 235 2.72e-57   NTclustered gi|1389430804|gb|MH341632.1| 1654720 g242601 i0 97.794 2.15923566878981 136 3 43 0 179 314 3082 2947 Chilodonella piscicola strain SC large subunit ribosomal RNA gene, partial sequence blastn 678 235 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola
10255963 10255963 PRJEB30004_P_NODE_661469_length_155_cov_1.387931_g645842_i0 PRJEB30004 661469 155 1.387931 2.15129305 Naviculales sp. 2126271 SAR_Eukaryotes SAR_Eukaryotes 231 1.53e-56   NTclustered gi|2785082235|gb|PQ157946.1| 2126271 g645842 i0 93.59 102.948387096774 156 8 100 2 1 155 5668 5514 Naviculales sp. strain SZCZO2114 mitochondrion, complete genome blastn 15957 231 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Naviculales     Naviculales sp.
12467600 12467600 PRJEB30004_P_NODE_219010_length_354_cov_8.155556_g203383_i0 PRJEB30004 219010 354 8.155556 28.87066824 Aphanomyces 100860 SAR_Eukaryotes SAR_Eukaryotes 649 0   NTclustered gi|363498776|gb|JN662487.1| 120398 g203383 i0 99.718 99.861581920904 354 1 100 0 1 354 721 368 Aphanomyces stellatus strain GF 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 35351 654 0.992354740061162 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces stellatus
12792562 12792562 PRJEB30004_P_NODE_367071_length_242_cov_2.408867_g351444_i0 PRJEB30004 367071 242 2.408867 5.82945814 Chilodonella piscicola 1654720 SAR_Eukaryotes SAR_Eukaryotes 363 8.869999999999999e-96   NTclustered gi|1389430804|gb|MH341632.1| 1654720 g351444 i0 93.776 17.004132231405 241 15 99 0 1 241 389 629 Chilodonella piscicola strain SC large subunit ribosomal RNA gene, partial sequence blastn 4115 363 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola
14080592 14080592 PRJEB30004_P_NODE_642732_length_158_cov_1.915966_g627105_i0 PRJEB30004 642732 158 1.915966 3.02722628 Esquamula lacrimiformis 1176540 SAR_Eukaryotes SAR_Eukaryotes 265 1.5399999999999998e-66   NTclustered gi|409971369|dbj|AB714271.1| 1176540 g627105 i0 97.436 104.158227848101 156 3 98 1 4 158 3856 3701 Esquamula lacrimiformis gene for 28S ribosomal RNA, partial sequence blastn 16457 265 1 Eukaryota Sar   Cercozoa Imbricatea Thaumatomonadida   Esquamula Esquamula lacrimiformis
15016319 15016319 PRJEB30004_P_NODE_141132_length_488_cov_4.035635_g125598_i0 PRJEB30004 141132 488 4.035635 19.6938988 Bacillariophyta 2836 SAR_Eukaryotes SAR_Eukaryotes 846 0   NTclustered gi|2194766164|gb|OK505009.1| 2856 g125598 i0 97.951 199 488 10 100 0 1 488 19116 19603 Cylindrotheca closterium chloroplast, complete genome blastn 97112 852 0.992957746478873 Eukaryota Sar   Bacillariophyta Bacillariophyceae Bacillariales Bacillariaceae Cylindrotheca Cylindrotheca closterium
16608919 16608919 PRJEB30004_P_NODE_219034_length_354_cov_5.444444_g203407_i0 PRJEB30004 219034 354 5.444444 19.27333176 Aphanomyces astaci 112090 SAR_Eukaryotes SAR_Eukaryotes 638 2.02e-178   NTclustered gi|698793876|ref|XR_717098.1| 112090 g203407 i0 99.153 101.635593220339 354 3 100 0 1 354 2508 2155 Aphanomyces astaci 28S ribosomal RNA rRNA blastn 35979 638 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces astaci
17566390 17566390 PRJEB30004_P_NODE_289874_length_289_cov_1.600000_g274247_i0 PRJEB30004 289874 289 1.6 4.624 Poterioochromonas 88166 SAR_Eukaryotes SAR_Eukaryotes 529 1.01e-145   NTclustered gi|323690576|gb|GU935635.1| 88167 g274247 i0 99.654 92.6955017301038 289 1 100 0 1 289 1443 1731 Poteriochroomonas malhamensis strain SAG 933.1c 28S ribosomal RNA gene, partial sequence blastn 26789 529 1 Eukaryota Sar     Synurophyceae Ochromonadales Ochromonadaceae Poterioochromonas Poterioochromonas malhamensis
17889899 17889899 PRJEB30004_P_NODE_351095_length_251_cov_1.037736_g335468_i0 PRJEB30004 351095 251 1.037736 2.60471736 Entomoneis sp. 186043 SAR_Eukaryotes SAR_Eukaryotes 102 2.23e-17   NTclustered gi|1372147530|gb|MF997419.1| 186043 g335468 i0 75.304 0.98406374501992 247 44 96 16 1 240 21460 21224 Entomoneis sp. mitochondrion, complete genome blastn 247 102 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae   Entomoneidaceae Entomoneis Entomoneis sp.
18840345 18840345 PRJEB30004_P_NODE_562275_length_175_cov_1.632353_g546648_i0 PRJEB30004 562275 175 1.632353 2.85661775 Chilodonella 151076 SAR_Eukaryotes SAR_Eukaryotes 313 6.13e-81   NTclustered gi|1389430804|gb|MH341632.1| 1654720 g546648 i0 98.857 14.1885714285714 175 2 100 0 1 175 1500 1674 Chilodonella piscicola strain SC large subunit ribosomal RNA gene, partial sequence blastn 2483 313 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola
20450456 20450456 PRJEB30004_P_NODE_588477_length_169_cov_1.776923_g572850_i0 PRJEB30004 588477 169 1.776923 3.00299987 Cyclidium glaucoma 35100 SAR_Eukaryotes SAR_Eukaryotes 278 2.14e-70   NTclustered gi|90657152|gb|DQ442810.1| 35100 g572850 i0 96.45 40.9230769230769 169 4 99 2 1 168 417 584 Cyclidium glaucoma isolate ES34 28S ribosomal RNA gene, partial sequence blastn 6916 278 1 Eukaryota Sar   Ciliophora Oligohymenophorea Pleuronematida Cyclidiidae Cyclidium Cyclidium glaucoma
21390654 21390654 PRJEB30004_P_NODE_244337_length_327_cov_2.479167_g228710_i0 PRJEB30004 244337 327 2.479167 8.10687609 Phytophthora 4783 SAR_Eukaryotes SAR_Eukaryotes 187 8.08e-43   NTclustered gi|2440150|emb|X75631.1| 4788 g228710 i0 89.726 44.3547400611621 146 15 45 0 180 325 3464 3319 P.megasperma gene for 28S ribosomal RNA blastn 14504 187 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora megasperma
22994882 22994882 PRJEB30004_P_NODE_448259_length_208_cov_1.633136_g432632_i0 PRJEB30004 448259 208 1.633136 3.39692288 Chilodonella piscicola 1654720 SAR_Eukaryotes SAR_Eukaryotes 279 7.68e-71   NTclustered gi|1389430804|gb|MH341632.1| 1654720 g432632 i0 90.909 6.36538461538461 209 17 100 2 1 208 107 314 Chilodonella piscicola strain SC large subunit ribosomal RNA gene, partial sequence blastn 1324 279 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola
22997789 22997789 PRJEB30004_P_NODE_508019_length_189_cov_1.846667_g492392_i0 PRJEB30004 508019 189 1.846667 3.49020063 Aphanomyces brasiliensis 2525538 SAR_Eukaryotes SAR_Eukaryotes 324 3.11e-84   NTclustered gi|2098511708|gb|OK235679.1| 2525538 g492392 i0 98.895 98.5132275132275 181 2 96 0 1 181 252 72 Aphanomyces brasiliensis voucher CCIBt4545 small subunit ribosomal RNA gene, partial sequence blastn 18619 324 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces brasiliensis
24256208 24256208 PRJEB30004_P_NODE_181420_length_406_cov_5.362398_g165811_i0 PRJEB30004 181420 406 5.362398 21.77133588 Phaeodactylum tricornutum 2850 SAR_Eukaryotes SAR_Eukaryotes 579 1.45e-160   NTclustered gi|146762526|gb|EF553458.1| 2850 g165811 i0 92.593 100.137931034483 405 27 99 3 2 405 4085 4487 Phaeodactylum tricornutum strain CCAP 1055/1 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 40656 579 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Naviculales Phaeodactylaceae Phaeodactylum Phaeodactylum tricornutum
30001838 30001838 PRJEB30004_P_NODE_234091_length_338_cov_1.635452_g218464_i0 PRJEB30004 234091 338 1.635452 5.52782776 Hondaea fermentalgiana 2315210 SAR_Eukaryotes SAR_Eukaryotes 89.7 2.31e-19   NR GBG33034.1 2315210 g218464 i0 43.5 0.958579881656805 108 59 94.1 1 330 13 109 216 GBG33034.1 Pentafunctional AROM polypeptide [Hondaea fermentalgiana] diamond 324 89.7 1 Eukaryota Sar     Bigyra Thraustochytrida Thraustochytriidae Hondaea Hondaea fermentalgiana
30475742 30475742 PRJEB30004_P_NODE_656433_length_156_cov_1.051282_g640806_i0 PRJEB30004 656433 156 1.051282 1.63999992 Aphanomyces euteiches 100861 SAR_Eukaryotes SAR_Eukaryotes 48.9 7.48e-5   NR KAF0724015.1 100861 g640806 i0 57.6 4.55769230769231 33 14 63.5 0 101 3 993 1025 KAF0724015.1 hypothetical protein Ae201684_017215 [Aphanomyces euteiches] diamond 711 49.3 0.991886409736308 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces euteiches

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;