RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJEB30004", tax_clade = "Cyanobacteriota/Melainabacteria group" and tax_phylum = "Candidatus Melainabacteria"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Candidatus Melainabacteria · 3 ✖

tax_kingdom 1

tax_clade 1

  • Cyanobacteriota/Melainabacteria group · 3 ✖

bioproject 1

  • PRJEB30004 · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2577006 2577006 PRJEB30004_P_NODE_104023_length_610_cov_3.005254_g88984_i0 PRJEB30004 104023 610 3.005254 18.3320494 Candidatus Melainabacteria bacterium MEL.A1 1899017 Bacteria Bacteria 344 8.9e-90   NTclustered gi|1079475020|gb|CP017245.1| 1899017 g88984 i0 77.671 89.055737704918 627 99 99 31 6 606 1478124 1478735 Candidatus Melainabacteria bacterium MEL.A1 chromosome, complete genome blastn 54324 344 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria         Candidatus Melainabacteria bacterium MEL.A1
8972836 8972836 PRJEB30004_P_NODE_507288_length_189_cov_2.233333_g491661_i0 PRJEB30004 507288 189 2.233333 4.22099937 Candidatus Melainabacteria bacterium 2052166 Bacteria Bacteria 124 3.3899999999999996e-24   NTclustered gi|1958007833|gb|CP064963.1| 2052166 g491661 i0 97.26 98.9470899470899 73 2 39 0 1 73 3680959 3681031 MAG: Candidatus Melainabacteria bacterium isolate Aved_18-Q3-R54-62_BATAC.358_cln chromosome, complete genome blastn 18701 124 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria         Candidatus Melainabacteria bacterium
32650312 32650312 PRJEB30004_P_NODE_632420_length_160_cov_1.867769_g616793_i0 PRJEB30004 632420 160 1.867769 2.9884304 Cyanobacteriota/Melainabacteria group 1798711 Bacteria Bacteria 48.1 1.53e-4   NR HEY9841736.1 2364082 g616793 i0 50 3.8625 52 23 95.6 2 153 1 1233 1282 HEY9841736.1 amino acid adenylation domain-containing protein [Candidatus Obscuribacterales bacterium] diamond 618 48.5 0.991752577319588 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria   Candidatus Obscuribacterales     Candidatus Obscuribacterales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;