RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJEB29441", tax_phylum = "Thermoproteota" and tax_superkingdom = "Archaea"

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tax_superkingdom 1

  • Archaea · 2 ✖

tax_phylum 1

  • Thermoproteota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJEB29441 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
16291030 16291030 PRJEB29441_P_NODE_40153_length_166_cov_0.871795_g39712_i0 PRJEB29441 40153 166 0.871795 1.4471797 Archaea 2157 Archaea Archaea 176 7.91e-40   NTclustered gi|42557759|emb|AJ627422.1| 29281 g39712 i0 86.061 14.3795180722892 165 21 99 2 1 164 42073 41910 Uncultured crenarchaeote genomic fragment 54d9 blastn 2387 176 1 Archaea   Thermoproteati Thermoproteota         uncultured crenarchaeote
25214350 25214350 PRJEB29441_P_NODE_29120_length_194_cov_1.537931_g28679_i0 PRJEB29441 29120 194 1.537931 2.98358614 Archaea 2157 Archaea Archaea 353 4.1e-93   NTclustered gi|471647793|gb|KC661570.1| 29281 g28679 i0 99.485 99.9948453608247 194 1 100 0 1 194 710 517 Uncultured crenarchaeote clone BC-J-R-W2-A5 16S ribosomal RNA gene, partial sequence blastn 19399 353 1 Archaea   Thermoproteati Thermoproteota         uncultured crenarchaeote

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;