RNAquarium Metadata Server
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contig_metadata

12 rows where bioproject = "PRJEB29441" and tax_phylum = "Rotifera"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Rotifera · 12 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB29441 · 12 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26484 26484 PRJEB29441_P_NODE_28981_length_194_cov_4.206897_g28540_i0 PRJEB29441 28981 194 4.206897 8.16138018 Lecane bulla 96446 Rotifera other_Eukaryota 348 1.91e-91   NTclustered gi|61200802|gb|AY829083.1| 96446 g28540 i0 98.974 99.639175257732 195 1 100 1 1 194 1627 1433 Lecane bulla 28S ribosomal RNA gene, partial sequence blastn 19330 348 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Lecanidae Lecane Lecane bulla
2576522 2576522 PRJEB29441_P_NODE_35543_length_175_cov_1.603175_g35102_i0 PRJEB29441 35543 175 1.603175 2.80555625 Brachionus calyciflorus 104777 Rotifera other_Eukaryota 109 3.92e-26   NR CAF0708291.1 104777 g35102 i0 85.7 0.96 56 8 96 0 2 169 299 354 CAF0708291.1 unnamed protein product [Brachionus calyciflorus] diamond 168 109 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus calyciflorus
7678523 7678523 PRJEB29441_P_NODE_15287_length_278_cov_4.938865_g14846_i0 PRJEB29441 15287 278 4.938865 13.7300447 Adineta vaga complex sp. B JFF-2016 1813165 Rotifera other_Eukaryota 497 2.73e-136   NTclustered gi|1005055631|gb|KU860774.1| 1813165 g14846 i0 98.921 26.3525179856115 278 3 100 0 1 278 1717 1440 Adineta vaga complex sp. B JFF-2016 isolate H158a 28S ribosomal RNA gene, partial sequence blastn 7326 497 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga complex sp. B JFF-2016
11191743 11191743 PRJEB29441_P_NODE_5809_length_492_cov_4.672686_g5376_i0 PRJEB29441 5809 492 4.672686 22.98961512 Opisthokonta 33154 Rotifera other_Eukaryota 505 3.069999999999999e-138   NTclustered gi|37785582|gb|AY210469.1| 96448 g5376 i0 85.404 92.6483739837398 507 51 100 17 1 492 829 331 Philodina roseola 28S ribosomal RNA gene, partial sequence blastn 45583 510 0.990196078431373 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Philodina Philodina roseola
14054844 14054844 PRJEB29441_P_NODE_38012_length_168_cov_4.966387_g37571_i0 PRJEB29441 38012 168 4.966387 8.34353016 Lecane bulla 96446 Rotifera other_Eukaryota 294 2.12e-75   NTclustered gi|61200802|gb|AY829083.1| 96446 g37571 i0 98.214 33.6488095238095 168 3 100 0 1 168 1851 2018 Lecane bulla 28S ribosomal RNA gene, partial sequence blastn 5653 294 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Lecanidae Lecane Lecane bulla
19151858 19151858 PRJEB29441_P_NODE_18216_length_251_cov_4.450495_g17775_i0 PRJEB29441 18216 251 4.450495 11.17074245 Adineta vaga 104782 Rotifera other_Eukaryota 327 3.37e-85   NTclustered gi|259129963|gb|GQ398061.1| 104782 g17775 i0 90.947 2.83665338645418 243 22 97 0 9 251 10398 10156 Adineta vaga 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence blastn 712 327 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga
22665063 22665063 PRJEB29441_P_NODE_18218_length_251_cov_3.841584_g17777_i0 PRJEB29441 18218 251 3.841584 9.64237584 Eurotatoria 2816136 Rotifera other_Eukaryota 442 1.1599999999999995e-119   NTclustered gi|2537903785|gb|KM043250.2| 758807 g17777 i0 98.406 93.4541832669323 251 4 100 0 1 251 292 42 Abrochtha sonneborni voucher Bird_3_2 18S ribosomal RNA gene, partial sequence blastn 23457 442 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinavida Philodinavidae Abrochtha Abrochtha sonneborni
22978180 22978180 PRJEB29441_P_NODE_10079_length_356_cov_9.736156_g9638_i0 PRJEB29441 10079 356 9.736156 34.66071536 Adineta vaga 104782 Rotifera other_Eukaryota 553 7.579999999999998e-153   NTclustered gi|259129963|gb|GQ398061.1| 104782 g9638 i0 94.663 77.0842696629213 356 19 100 0 1 356 6650 7005 Adineta vaga 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence blastn 27442 553 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga
22978700 22978700 PRJEB29441_P_NODE_41139_length_165_cov_1.758621_g40698_i0 PRJEB29441 41139 165 1.758621 2.90172465 Lecane bulla 96446 Rotifera other_Eukaryota 283 4.4899999999999995e-72   NTclustered gi|83285189|gb|DQ297736.1| 96446 g40698 i0 97.576 18.6363636363636 165 4 100 0 1 165 192 28 Lecane bulla 28S ribosomal RNA gene, partial sequence blastn 3075 283 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Lecanidae Lecane Lecane bulla
22978887 22978887 PRJEB29441_P_NODE_9099_length_378_cov_7.680851_g8658_i0 PRJEB29441 9099 378 7.680851 29.03361678 Lecane bulla 96446 Rotifera other_Eukaryota 516 1.06e-141   NTclustered gi|61200802|gb|AY829083.1| 96446 g8658 i0 91.27 34.4656084656085 378 33 100 0 1 378 417 40 Lecane bulla 28S ribosomal RNA gene, partial sequence blastn 13028 516 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Lecanidae Lecane Lecane bulla
26589787 26589787 PRJEB29441_P_NODE_42881_length_164_cov_0.886957_g42440_i0 PRJEB29441 42881 164 0.886957 1.45460948 Rotaria sordida 392033 Rotifera other_Eukaryota 72.8 3.23e-13   NR CAF1123067.1 392033 g42440 i0 57.4 3.95121951219512 54 23 98.8 0 2 163 544 597 CAF1123067.1 unnamed protein product [Rotaria sordida] diamond 648 72.8 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Rotaria Rotaria sordida
26780160 26780160 PRJEB29441_P_NODE_31061_length_188_cov_1.194245_g30620_i0 PRJEB29441 31061 188 1.194245 2.2451806 Adineta vaga 104782 Rotifera other_Eukaryota 67.8 2.72e-12   NR UJR27921.1 104782 g30620 i0 56.4 3.28723404255319 55 24 87.8 0 24 188 1 55 UJR27921.1 hypothetical protein I4U23_009181 [Adineta vaga] diamond 618 67.8 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;