RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJEB29441" and tax_phylum = "Echinodermata"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Echinodermata · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB29441 · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7678495 7678495 PRJEB29441_P_NODE_13947_length_294_cov_1.624490_g13506_i0 PRJEB29441 13947 294 1.62449 4.7760006 Anneissia japonica 1529436 Echinodermata other_Eukaryota 52.8 0.027   NTclustered gi|1826614684|ref|XM_033244415.1| 1529436 g13506 i0 100 0.19047619047619 28 0 10 0 125 152 700 727 PREDICTED: Anneissia japonica uncharacterized LOC117103791 (LOC117103791), transcript variant X1, mRNA blastn 56 52.8 1 Eukaryota Opisthokonta Metazoa Echinodermata Crinoidea Comatulida Comatulidae Anneissia Anneissia japonica
32049808 32049808 PRJEB29441_P_NODE_42838_length_164_cov_0.886957_g42397_i0 PRJEB29441 42838 164 0.886957 1.45460948 Metazoa 33208 Echinodermata other_Eukaryota 54.7 7.75e-7   NR XP_063955624.1 7653 g42397 i0 54 6.42073170731707 50 19 86 2 23 163 710 758 XP_063955624.1 uncharacterized protein LOC135154209 [Lytechinus pictus] diamond 1053 55.1 0.992740471869329 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Temnopleuroida Toxopneustidae Lytechinus Lytechinus pictus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;