RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

2 rows where bioproject = "PRJEB29441", tax_kingdom = "Metazoa" and tax_phylum = "Annelida"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Annelida · 2 ✖

tax_kingdom 1

  • Metazoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJEB29441 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
17878123 17878123 PRJEB29441_P_NODE_25835_length_207_cov_1.291139_g25394_i0 PRJEB29441 25835 207 1.291139 2.67265773 Pristina sp. CEE 3386361 Annelida Annelida 383 5.65e-102   NTclustered gi|2889117355|gb|PP138076.1| 3386361 g25394 i0 100 94.1787439613527 207 0 100 0 1 207 118 324 Pristina sp. CEE voucher CE2232 16S ribosomal RNA gene, partial sequence; mitochondrial blastn 19495 383 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Tubificida Naididae Pristina Pristina sp. CEE
22665035 22665035 PRJEB29441_P_NODE_12578_length_313_cov_1.848485_g12137_i0 PRJEB29441 12578 313 1.848485 5.78575805 Clitellata 42113 Annelida Annelida 54.7 0.008   NTclustered gi|2918369693|emb|OZ237785.1| 311461 g12137 i0 94.286 0.495207667731629 35 2 11 0 113 147 2966675 2966709 Hirudo verbana genome assembly, chromosome: 7 blastn 155 54.7 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Hirudinida Hirudinidae Hirudo Hirudo verbana

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;