contig_metadata
14 rows where bioproject = "PRJEB29441" and tax_kingdom = "Fusobacteriati"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 2576673 | 2576673 | PRJEB29441_P_NODE_45183_length_162_cov_1.371681_g44742_i0 | PRJEB29441 | 45183 | 162 | 1.371681 | 2.22212322 | Fusobacterium mortiferum | 850 | Bacteria | Bacteria | 207 | 2.72e-49 | NTclustered | gi|1370540179|gb|CP028102.1| | 469616 | g44742 | i0 | 90.506 | 280.160493827161 | 158 | 13 | 97 | 2 | 4 | 160 | 104186 | 104030 | Fusobacterium mortiferum ATCC 9817 chromosome, complete genome | blastn | 45386 | 207 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium mortiferum | ||
| 2576805 | 2576805 | PRJEB29441_P_NODE_843_length_1329_cov_5.054688_g695_i0 | PRJEB29441 | 843 | 1329 | 5.054688 | 67.176803520000007 | Leptotrichia sp. oral taxon 221 | 712362 | Bacteria | Bacteria | 1351 | 0 | NTclustered | gi|2028889048|gb|CP072378.1| | 712362 | g695 | i0 | 85.957 | 464.785553047404 | 1296 | 144 | 96 | 33 | 45 | 1323 | 1713153 | 1714427 | Leptotrichia sp. oral taxon 221 strain F0705 chromosome, complete genome | blastn | 617700 | 1351 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia sp. oral taxon 221 | ||
| 4816287 | 4816287 | PRJEB29441_P_NODE_6624_length_456_cov_17.714988_g6185_i0 | PRJEB29441 | 6624 | 456 | 17.714988 | 80.78034528 | Fusobacterium | 848 | Bacteria | Bacteria | 743 | 0 | NTclustered | gi|1370537877|gb|CP028108.1| | 860 | g6185 | i0 | 96.07 | 449.449561403509 | 458 | 15 | 100 | 2 | 1 | 456 | 462034 | 461578 | Fusobacterium periodonticum strain 2_1_31 chromosome, complete genome | blastn | 204949 | 749 | 0.991989319092123 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium periodonticum | ||
| 10229637 | 10229637 | PRJEB29441_P_NODE_5009_length_534_cov_3.806186_g4584_i0 | PRJEB29441 | 5009 | 534 | 3.806186 | 20.32503324 | Leptotrichia hofstadii | 157688 | Bacteria | Bacteria | 948 | 0 | NTclustered | gi|1708566027|dbj|AP019823.1| | 157688 | g4584 | i0 | 98.689 | 227.677902621723 | 534 | 7 | 100 | 0 | 1 | 534 | 497715 | 498248 | Leptotrichia hofstadii JCM16775 DNA, complete genome | blastn | 121580 | 948 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia hofstadii | ||
| 11504736 | 11504736 | PRJEB29441_P_NODE_350_length_1923_cov_12.266275_g266_i1 | PRJEB29441 | 350 | 1923 | 12.266275 | 235.88046825 | Fusobacterium polymorphum | 76857 | Bacteria | Bacteria | 3408 | 0 | NTclustered | gi|2704883040|gb|CP056004.1| | 76857 | g266 | i1 | 98.649 | 476.91887675507 | 1925 | 23 | 100 | 2 | 1 | 1923 | 2319007 | 2320930 | Fusobacterium polymorphum strain SB016 chromosome, complete genome | blastn | 917115 | 3408 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium polymorphum | ||
| 12779875 | 12779875 | PRJEB29441_P_NODE_17211_length_260_cov_1.412322_g16770_i0 | PRJEB29441 | 17211 | 260 | 1.412322 | 3.6720372 | Sneathia vaginalis | 187101 | Bacteria | Bacteria | 477 | 3.3e-130 | NTclustered | gi|808076794|gb|CP011280.1| | 187101 | g16770 | i0 | 100 | 385.538461538462 | 258 | 0 | 99 | 0 | 1 | 258 | 161146 | 161403 | Sneathia vaginalis strain SN35 chromosome, complete genome | blastn | 100240 | 477 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Sneathia | Sneathia vaginalis | ||
| 15016035 | 15016035 | PRJEB29441_P_NODE_15392_length_277_cov_10.864035_g14951_i0 | PRJEB29441 | 15392 | 277 | 10.864035 | 30.09337695 | Cetobacterium | 180162 | Bacteria | Bacteria | 512 | 9.73e-141 | NTclustered | gi|2865368125|gb|CP122294.1| | 188913 | g14951 | i0 | 100 | 535.523465703971 | 277 | 0 | 100 | 0 | 1 | 277 | 280770 | 280494 | Cetobacterium somerae strain MSU41 plasmid p41_t2, complete sequence | blastn | 148340 | 512 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Cetobacterium | Cetobacterium somerae | ||
| 17566171 | 17566171 | PRJEB29441_P_NODE_35134_length_176_cov_1.606299_g34693_i0 | PRJEB29441 | 35134 | 176 | 1.606299 | 2.82708624 | Leptotrichia | 32067 | Bacteria | Bacteria | 326 | 7.92e-85 | NTclustered | gi|33860342|gb|AY349385.1| | 242674 | g34693 | i0 | 100 | 104.164772727273 | 176 | 0 | 100 | 0 | 1 | 176 | 315 | 140 | Leptotrichia sp. oral clone GT020 16S ribosomal RNA gene, partial sequence | blastn | 18333 | 326 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia sp. oral clone GT020 | ||
| 19152013 | 19152013 | PRJEB29441_P_NODE_27696_length_199_cov_2.013333_g27255_i0 | PRJEB29441 | 27696 | 199 | 2.013333 | 4.00653267 | Leptotrichia trevisanii | 109328 | Bacteria | Bacteria | 344 | 2.5399999999999993e-90 | NTclustered | gi|1708572621|dbj|AP019831.1| | 109328 | g27255 | i0 | 97.98 | 212.120603015075 | 198 | 4 | 99 | 0 | 2 | 199 | 572359 | 572162 | Leptotrichia trevisanii JMUB3870 DNA, complete genome | blastn | 42212 | 344 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia trevisanii | ||
| 19152284 | 19152284 | PRJEB29441_P_NODE_43936_length_163_cov_1.096491_g43495_i0 | PRJEB29441 | 43936 | 163 | 1.096491 | 1.78728033 | Leptotrichia wadei | 157687 | Bacteria | Bacteria | 279 | 5.73e-71 | NTclustered | gi|1708577445|dbj|AP019835.1| | 157687 | g43495 | i0 | 97.561 | 243.852760736196 | 164 | 2 | 100 | 2 | 1 | 163 | 2368806 | 2368968 | Leptotrichia wadei JMUB3934 DNA, complete genome | blastn | 39748 | 279 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia wadei | ||
| 19152360 | 19152360 | PRJEB29441_P_NODE_48696_length_152_cov_2.310680_g48255_i0 | PRJEB29441 | 48696 | 152 | 2.31068 | 3.5122336 | Leptotrichia wadei | 157687 | Bacteria | Bacteria | 281 | 1.46e-71 | NTclustered | gi|1708575239|dbj|AP019834.1| | 157687 | g48255 | i0 | 100 | 384.401315789474 | 152 | 0 | 100 | 0 | 1 | 152 | 1693990 | 1694141 | Leptotrichia wadei JMUB3933 DNA, complete genome | blastn | 58429 | 281 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia wadei | ||
| 21703567 | 21703567 | PRJEB29441_P_NODE_48378_length_154_cov_4.600000_g47937_i0 | PRJEB29441 | 48378 | 154 | 4.6 | 7.084 | Pseudoleptotrichia goodfellowii | 157692 | Bacteria | Bacteria | 185 | 1.1899999999999997e-42 | NTclustered | gi|1708563796|dbj|AP019822.1| | 157692 | g47937 | i0 | 89.189 | 221.435064935065 | 148 | 16 | 96 | 0 | 7 | 154 | 397264 | 397117 | Leptotrichia goodfellowii JCM16774 DNA, complete genome | blastn | 34101 | 185 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Pseudoleptotrichia | Pseudoleptotrichia goodfellowii | ||
| 24252195 | 24252195 | PRJEB29441_P_NODE_21640_length_227_cov_2.724719_g21199_i0 | PRJEB29441 | 21640 | 227 | 2.724719 | 6.18511213 | Fusobacterium mortiferum | 850 | Bacteria | Bacteria | 420 | 4.81e-113 | NTclustered | gi|1370540179|gb|CP028102.1| | 469616 | g21199 | i0 | 100 | 523.066079295154 | 227 | 0 | 100 | 0 | 1 | 227 | 104448 | 104674 | Fusobacterium mortiferum ATCC 9817 chromosome, complete genome | blastn | 118736 | 420 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium mortiferum | ||
| 24252642 | 24252642 | PRJEB29441_P_NODE_6740_length_452_cov_2.136476_g6301_i0 | PRJEB29441 | 6740 | 452 | 2.136476 | 9.65687152 | Leptotrichia trevisanii | 109328 | Bacteria | Bacteria | 797 | 0 | NTclustered | gi|1708572621|dbj|AP019831.1| | 109328 | g6301 | i0 | 98.455 | 479.37610619469 | 453 | 5 | 100 | 2 | 1 | 452 | 160212 | 159761 | Leptotrichia trevisanii JMUB3870 DNA, complete genome | blastn | 216678 | 797 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia trevisanii |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;