contig_metadata
11 rows where bioproject = "PRJEB29441", tax_clade = "PVC group" and tax_phylum = "Chlamydiota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 26162 | 26162 | PRJEB29441_P_NODE_10601_length_346_cov_1.713805_g10160_i0 | PRJEB29441 | 10601 | 346 | 1.713805 | 5.9297653 | Parachlamydiales bacterium | 2052178 | Bacteria | Bacteria | 449 | 9.94e-122 | NTclustered | gi|2874253843|emb|OY969899.1| | 2052178 | g10160 | i0 | 90.173 | 107.878612716763 | 346 | 32 | 100 | 2 | 1 | 346 | 2621538 | 2621881 | MAG: Parachlamydiales bacterium isolate MFD00082.bin.c.1 genome assembly, chromosome: 1 | blastn | 37326 | 449 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiales bacterium | |||
| 988337 | 988337 | PRJEB29441_P_NODE_37521_length_170_cov_1.371901_g37080_i0 | PRJEB29441 | 37521 | 170 | 1.371901 | 2.3322317 | Candidatus Protochlamydia | 282132 | Bacteria | Bacteria | 259 | 7.8e-65 | NTclustered | gi|1691252667|emb|BX908798.2| | 264201 | g37080 | i0 | 94.152 | 50.5 | 171 | 9 | 100 | 1 | 1 | 170 | 1250027 | 1250197 | Candidatus Protochlamydia amoebophila UWE25 complete genome | blastn | 8585 | 259 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | Candidatus Protochlamydia | Candidatus Protochlamydia amoebophila | |
| 1300903 | 1300903 | PRJEB29441_P_NODE_35402_length_175_cov_2.428571_g34961_i0 | PRJEB29441 | 35402 | 175 | 2.428571 | 4.24999925 | Parachlamydiales bacterium | 2052178 | Bacteria | Bacteria | 226 | 8.209999999999999e-55 | NTclustered | gi|2874253843|emb|OY969899.1| | 2052178 | g34961 | i0 | 90.588 | 1.96571428571429 | 170 | 16 | 97 | 0 | 1 | 170 | 2625034 | 2624865 | MAG: Parachlamydiales bacterium isolate MFD00082.bin.c.1 genome assembly, chromosome: 1 | blastn | 344 | 226 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiales bacterium | |||
| 2576442 | 2576442 | PRJEB29441_P_NODE_30363_length_190_cov_1.397163_g29922_i0 | PRJEB29441 | 30363 | 190 | 1.397163 | 2.6546097 | Candidatus Protochlamydia naegleriophila | 389348 | Bacteria | Bacteria | 263 | 6.93e-66 | NTclustered | gi|971146634|emb|LN879502.1| | 389348 | g29922 | i0 | 91.667 | 132.768421052632 | 192 | 12 | 100 | 3 | 1 | 190 | 1249825 | 1249636 | Protochlamydia naegleriophila genome assembly PNK1, chromosome : cPNK | blastn | 25226 | 263 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | Candidatus Protochlamydia | Candidatus Protochlamydia naegleriophila | |
| 3853027 | 3853027 | PRJEB29441_P_NODE_6864_length_447_cov_2.165829_g6425_i0 | PRJEB29441 | 6864 | 447 | 2.165829 | 9.68125563 | Parachlamydiales bacterium | 2052178 | Bacteria | Bacteria | 516 | 1.28e-141 | NTclustered | gi|2874253843|emb|OY969899.1| | 2052178 | g6425 | i0 | 87.611 | 59.2885906040268 | 452 | 46 | 100 | 7 | 1 | 447 | 2625486 | 2625040 | MAG: Parachlamydiales bacterium isolate MFD00082.bin.c.1 genome assembly, chromosome: 1 | blastn | 26502 | 516 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiales bacterium | |||
| 7679046 | 7679046 | PRJEB29441_P_NODE_4547_length_566_cov_4.032882_g4128_i0 | PRJEB29441 | 4547 | 566 | 4.032882 | 22.82611212 | Candidatus Protochlamydia naegleriophila | 389348 | Bacteria | Bacteria | 898 | 0 | NTclustered | gi|971146634|emb|LN879502.1| | 389348 | g4128 | i0 | 95.707 | 104.249116607774 | 559 | 22 | 99 | 2 | 1 | 558 | 1262844 | 1262287 | Protochlamydia naegleriophila genome assembly PNK1, chromosome : cPNK | blastn | 59005 | 898 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | Candidatus Protochlamydia | Candidatus Protochlamydia naegleriophila | |
| 8953545 | 8953545 | PRJEB29441_P_NODE_30388_length_190_cov_1.255319_g29947_i0 | PRJEB29441 | 30388 | 190 | 1.255319 | 2.3851061 | uncultured Parachlamydiaceae bacterium | 464461 | Bacteria | Bacteria | 217 | 5.469999999999999e-52 | NTclustered | gi|2874253811|emb|OY969795.1| | 464461 | g29947 | i0 | 88.889 | 109.131578947368 | 180 | 15 | 98 | 5 | 1 | 178 | 654886 | 655062 | MAG: uncultured Parachlamydiaceae bacterium isolate MFD05502.bin.c.3 genome assembly, chromosome: 1 | blastn | 20735 | 217 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | uncultured Parachlamydiaceae bacterium | ||
| 11504350 | 11504350 | PRJEB29441_P_NODE_14570_length_286_cov_4.021097_g14129_i0 | PRJEB29441 | 14570 | 286 | 4.021097 | 11.50033742 | Candidatus Protochlamydia naegleriophila | 389348 | Bacteria | Bacteria | 497 | 2.82e-136 | NTclustered | gi|971146634|emb|LN879502.1| | 389348 | g14129 | i0 | 98.239 | 199.702797202797 | 284 | 5 | 99 | 0 | 3 | 286 | 1251458 | 1251175 | Protochlamydia naegleriophila genome assembly PNK1, chromosome : cPNK | blastn | 57115 | 497 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | Candidatus Protochlamydia | Candidatus Protochlamydia naegleriophila | |
| 17878499 | 17878499 | PRJEB29441_P_NODE_675_length_1459_cov_3.644681_g557_i0 | PRJEB29441 | 675 | 1459 | 3.644681 | 53.17589579 | Candidatus Protochlamydia naegleriophila | 389348 | Bacteria | Bacteria | 2638 | 0 | NTclustered | gi|971146634|emb|LN879502.1| | 389348 | g557 | i0 | 99.315 | 119.493488690884 | 1459 | 9 | 100 | 1 | 1 | 1459 | 1249618 | 1251075 | Protochlamydia naegleriophila genome assembly PNK1, chromosome : cPNK | blastn | 174341 | 2638 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | Candidatus Protochlamydia | Candidatus Protochlamydia naegleriophila | |
| 19152275 | 19152275 | PRJEB29441_P_NODE_43356_length_164_cov_0.886957_g42915_i0 | PRJEB29441 | 43356 | 164 | 0.886957 | 1.45460948 | uncultured Parachlamydiaceae bacterium | 464461 | Bacteria | Bacteria | 171 | 3.62e-38 | NTclustered | gi|2874253811|emb|OY969795.1| | 464461 | g42915 | i0 | 87.248 | 0.908536585365854 | 149 | 19 | 91 | 0 | 2 | 150 | 2059962 | 2060110 | MAG: uncultured Parachlamydiaceae bacterium isolate MFD05502.bin.c.3 genome assembly, chromosome: 1 | blastn | 149 | 171 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | uncultured Parachlamydiaceae bacterium | ||
| 20427523 | 20427523 | PRJEB29441_P_NODE_48637_length_152_cov_3.456311_g48196_i0 | PRJEB29441 | 48637 | 152 | 3.456311 | 5.25359272 | Candidatus Protochlamydia naegleriophila | 389348 | Bacteria | Bacteria | 270 | 3.15e-68 | NTclustered | gi|971146634|emb|LN879502.1| | 389348 | g48196 | i0 | 98.684 | 296.690789473684 | 152 | 2 | 100 | 0 | 1 | 152 | 1249576 | 1249425 | Protochlamydia naegleriophila genome assembly PNK1, chromosome : cPNK | blastn | 45097 | 270 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | Candidatus Protochlamydia | Candidatus Protochlamydia naegleriophila |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;