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contig_metadata

9 rows where bioproject = "PRJEB29441", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Saccharimonadota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Candidatus Saccharimonadota · 9 ✖

tax_clade 1

  • Bacteria candidate phyla · 9 ✖

bioproject 1

  • PRJEB29441 · 9 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5129011 5129011 PRJEB29441_P_NODE_34865_length_177_cov_1.210938_g34424_i0 PRJEB29441 34865 177 1.210938 2.14336026 uncultured Candidatus Saccharibacteria bacterium 179883 Bacteria Bacteria 239 1.07e-58   NTclustered gi|2874253873|emb|OY969928.1| 179883 g34424 i0 90.96 82.1299435028249 177 16 100 0 1 177 597313 597489 MAG: uncultured Candidatus Saccharibacteria bacterium isolate MFD04212.bin.c.13 genome assembly, chromosome: 1 blastn 14537 239 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         uncultured Candidatus Saccharibacteria bacterium
5129113 5129113 PRJEB29441_P_NODE_41025_length_165_cov_2.465517_g40584_i0 PRJEB29441 41025 165 2.465517 4.06810305 Candidatus Saccharibacteria bacterium GW2011_GWC2_44_17 1619070 Bacteria Bacteria 294 2.08e-75   NTclustered gi|837350690|gb|CP011211.1| 1619070 g40584 i0 98.788 63.3151515151515 165 2 100 0 1 165 851672 851508 Candidatus Saccharibacteria bacterium GW2011_GWC2_44_17, complete genome blastn 10447 294 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharibacteria bacterium GW2011_GWC2_44_17
6091439 6091439 PRJEB29441_P_NODE_36225_length_173_cov_1.653226_g35784_i0 PRJEB29441 36225 173 1.653226 2.86008098 Candidatus Nanosynbacteraceae 2093822 Bacteria Bacteria 263 6.169999999999999e-66   NTclustered gi|1842054184|gb|CP039999.1| 713059 g35784 i0 94.22 123.85549132948 173 9 100 1 1 173 142212 142383 Candidatus Saccharibacteria bacterium oral taxon 488 strain CM001 chromosome, complete genome blastn 21427 263 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharibacteria bacterium oral taxon 488
7366016 7366016 PRJEB29441_P_NODE_8066_length_406_cov_2.187675_g7627_i0 PRJEB29441 8066 406 2.187675 8.8819605 Candidatus Minimicrobia 2905967 Bacteria Bacteria 568 3.13e-157   NTclustered gi|2306607015|emb|OX335598.1| 2026720 g7627 i0 92.157 257.773399014778 408 23 100 5 1 406 80537 80937 Candidatus Saccharibacteria bacterium isolate PRJEB56001 genome assembly, chromosome: contig00001 blastn 104656 568 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
7678908 7678908 PRJEB29441_P_NODE_36807_length_172_cov_1.195122_g36366_i0 PRJEB29441 36807 172 1.195122 2.05560984 Candidatus Nanogingivalaceae bacterium 2725942 Bacteria Bacteria 307 2.79e-79   NTclustered gi|2070571752|gb|CP072208.2| 2725942 g36366 i0 98.837 108.302325581395 172 2 100 0 1 172 112313 112484 MAG: Candidatus Nanogingivalaceae bacterium isolate JCVI_27_bin.3 chromosome, complete genome blastn 18628 307 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Nanosyncoccalia Candidatus Nanogingivales Candidatus Nanogingivalaceae   Candidatus Nanogingivalaceae bacterium
10229109 10229109 PRJEB29441_P_NODE_17369_length_258_cov_5.023923_g16928_i0 PRJEB29441 17369 258 5.023923 12.96172134 Candidatus Saccharibacteria bacterium TM7i 2980174 Bacteria Bacteria 431 2.58e-116   NTclustered gi|2306681518|gb|CP075337.1| 2980174 g16928 i0 96.887 252.895348837209 257 8 99 0 1 257 667790 667534 Candidatus Saccharibacteria bacterium TM7i chromosome, complete genome blastn 65247 431 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharibacteria bacterium TM7i
25214244 25214244 PRJEB29441_P_NODE_14220_length_291_cov_1.603306_g13779_i0 PRJEB29441 14220 291 1.603306 4.66562046 Candidatus Nanosynbacter 2093823 Bacteria Bacteria 481 2.899999999999999e-131   NTclustered gi|1842054184|gb|CP039999.1| 713059 g13779 i0 96.564 83.2783505154639 291 8 100 1 1 291 143535 143823 Candidatus Saccharibacteria bacterium oral taxon 488 strain CM001 chromosome, complete genome blastn 24234 481 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharibacteria bacterium oral taxon 488
26938179 26938179 PRJEB29441_P_NODE_42122_length_165_cov_0.879310_g41681_i0 PRJEB29441 42122 165 0.87931 1.4508615 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 57.8 8.03e-9   NR MCA9330407.1 2026720 g41681 i0 53.8 0.945454545454545 52 23 92.7 1 3 155 45 96 MCA9330407.1 hypothetical protein [Candidatus Saccharibacteria bacterium] diamond 156 57.8 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
27343061 27343061 PRJEB29441_P_NODE_46203_length_162_cov_0.902655_g45762_i0 PRJEB29441 46203 162 0.902655 1.4623011 Candidatus Saccharimonadota 95818 Bacteria Bacteria 102 9.04e-24   NR RKW02091.1 1917697 g45762 i0 92.6 9 54 4 100 0 1 162 88 141 RKW02091.1 MAG: DUF87 domain-containing protein, partial [Candidatus Saccharimonas sp.] diamond 1458 102 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia Candidatus Saccharimonadales Candidatus Saccharimonadaceae Candidatus Saccharimonas Candidatus Saccharimonas sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;