RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJEB29441", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Binatota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Candidatus Binatota · 2 ✖

tax_clade 1

  • Bacteria candidate phyla · 2 ✖

bioproject 1

  • PRJEB29441 · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
10229546 10229546 PRJEB29441_P_NODE_41949_length_165_cov_0.879310_g41508_i0 PRJEB29441 41949 165 0.87931 1.4508615 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 206 1e-48   NTclustered gi|2814788338|emb|OY761159.2| 2838779 g41508 i0 91.837 47.6 147 12 89 0 19 165 3737935 3738081 MAG: Candidatus Binatia bacterium isolate a3054953-5fa8-48fb-90a5-e173aac96f7a genome assembly, chromosome: 1 blastn 7854 206 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
28486051 28486051 PRJEB29441_P_NODE_45427_length_162_cov_0.902655_g44986_i0 PRJEB29441 45427 162 0.902655 1.4623011 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 58.5 3.24e-8   NR HEY7559028.1 2838779 g44986 i0 47.2 0.981481481481482 53 28 98.1 0 161 3 175 227 HEY7559028.1 ATP-binding protein [Candidatus Binatia bacterium] diamond 159 58.5 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;