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contig_metadata

32 rows where bioproject = "PRJEB29441" and tax_clade = "Bacteria candidate phyla"

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tax_superkingdom 1

tax_clade 1

  • Bacteria candidate phyla · 32 ✖

bioproject 1

  • PRJEB29441 · 32 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26303 26303 PRJEB29441_P_NODE_18861_length_247_cov_1.030303_g18420_i0 PRJEB29441 18861 247 1.030303 2.54484841 Patescibacteria group bacterium 2052139 Bacteria Bacteria 108 4.7e-19   NTclustered gi|2621785934|emb|OY782392.1| 2052139 g18420 i0 81.481 0.546558704453441 135 21 54 2 23 156 938528 938659 MAG: Patescibacteria group bacterium isolate 573f42cd-6ce4-4b95-a45b-0ed028197a55 genome assembly, chromosome: 1 blastn 135 108 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium
26590 26590 PRJEB29441_P_NODE_34861_length_177_cov_1.242188_g34420_i0 PRJEB29441 34861 177 1.242188 2.19867276 Candidatus Nomurabacteria bacterium 2052152 Bacteria Bacteria 298 1.74e-76   NTclustered gi|2258875662|gb|CP060232.1| 2052152 g34420 i0 97.175 124.395480225989 177 4 99 1 1 176 964176 964000 MAG: Candidatus Nomurabacteria bacterium isolate HK-STAS-PATE-40 chromosome, complete genome blastn 22018 298 1 Bacteria Bacteria candidate phyla   Candidatus Nomuraibacteriota         Candidatus Nomurabacteria bacterium
5129011 5129011 PRJEB29441_P_NODE_34865_length_177_cov_1.210938_g34424_i0 PRJEB29441 34865 177 1.210938 2.14336026 uncultured Candidatus Saccharibacteria bacterium 179883 Bacteria Bacteria 239 1.07e-58   NTclustered gi|2874253873|emb|OY969928.1| 179883 g34424 i0 90.96 82.1299435028249 177 16 100 0 1 177 597313 597489 MAG: uncultured Candidatus Saccharibacteria bacterium isolate MFD04212.bin.c.13 genome assembly, chromosome: 1 blastn 14537 239 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         uncultured Candidatus Saccharibacteria bacterium
5129113 5129113 PRJEB29441_P_NODE_41025_length_165_cov_2.465517_g40584_i0 PRJEB29441 41025 165 2.465517 4.06810305 Candidatus Saccharibacteria bacterium GW2011_GWC2_44_17 1619070 Bacteria Bacteria 294 2.08e-75   NTclustered gi|837350690|gb|CP011211.1| 1619070 g40584 i0 98.788 63.3151515151515 165 2 100 0 1 165 851672 851508 Candidatus Saccharibacteria bacterium GW2011_GWC2_44_17, complete genome blastn 10447 294 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharibacteria bacterium GW2011_GWC2_44_17
5129232 5129232 PRJEB29441_P_NODE_48825_length_151_cov_2.127451_g48384_i0 PRJEB29441 48825 151 2.127451 3.21245101 Candidatus Peribacteria bacterium 2053688 Bacteria Bacteria 154 3.28e-33   NTclustered gi|2225492643|gb|CP082927.1| 2053688 g48384 i0 85.714 144.748344370861 147 20 97 1 1 147 192864 193009 MAG: Candidatus Peribacteria bacterium isolate LakeFargette_0920_ALND_MAG_52_24 chromosome, complete genome blastn 21857 154 1 Bacteria Bacteria candidate phyla   Candidatus Peregrinibacteriota Candidatus Peribacteria       Candidatus Peribacteria bacterium
6091439 6091439 PRJEB29441_P_NODE_36225_length_173_cov_1.653226_g35784_i0 PRJEB29441 36225 173 1.653226 2.86008098 Candidatus Nanosynbacteraceae 2093822 Bacteria Bacteria 263 6.169999999999999e-66   NTclustered gi|1842054184|gb|CP039999.1| 713059 g35784 i0 94.22 123.85549132948 173 9 100 1 1 173 142212 142383 Candidatus Saccharibacteria bacterium oral taxon 488 strain CM001 chromosome, complete genome blastn 21427 263 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharibacteria bacterium oral taxon 488
7366016 7366016 PRJEB29441_P_NODE_8066_length_406_cov_2.187675_g7627_i0 PRJEB29441 8066 406 2.187675 8.8819605 Candidatus Minimicrobia 2905967 Bacteria Bacteria 568 3.13e-157   NTclustered gi|2306607015|emb|OX335598.1| 2026720 g7627 i0 92.157 257.773399014778 408 23 100 5 1 406 80537 80937 Candidatus Saccharibacteria bacterium isolate PRJEB56001 genome assembly, chromosome: contig00001 blastn 104656 568 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
7678526 7678526 PRJEB29441_P_NODE_15447_length_277_cov_1.605263_g15006_i0 PRJEB29441 15447 277 1.605263 4.44657851 Candidatus Phycocordibacter aenigmaticus 1948796 Bacteria Bacteria 222 1.84e-53   NTclustered gi|2862534145|gb|CP174359.1| 1948796 g15006 i0 82.197 10.3393501805054 264 41 94 5 1 259 75407 75669 MAG: Patescibacteria group bacterium UBA2163 chromosome, complete genome blastn 2864 222 1 Bacteria Bacteria candidate phyla   Minisyncoccota Minisyncoccia Candidatus Phycocordibacterales Candidatus Phycocordibacteraceae Candidatus Phycocordibacter Candidatus Phycocordibacter aenigmaticus
7678908 7678908 PRJEB29441_P_NODE_36807_length_172_cov_1.195122_g36366_i0 PRJEB29441 36807 172 1.195122 2.05560984 Candidatus Nanogingivalaceae bacterium 2725942 Bacteria Bacteria 307 2.79e-79   NTclustered gi|2070571752|gb|CP072208.2| 2725942 g36366 i0 98.837 108.302325581395 172 2 100 0 1 172 112313 112484 MAG: Candidatus Nanogingivalaceae bacterium isolate JCVI_27_bin.3 chromosome, complete genome blastn 18628 307 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Nanosyncoccalia Candidatus Nanogingivales Candidatus Nanogingivalaceae   Candidatus Nanogingivalaceae bacterium
8953340 8953340 PRJEB29441_P_NODE_18508_length_249_cov_2.095000_g18067_i0 PRJEB29441 18508 249 2.095 5.21655 candidate division SR1 bacterium RAAC1_SR1_1 1394709 Bacteria Bacteria 276 1.2299999999999999e-69   NTclustered gi|563351663|gb|CP006913.1| 1394709 g18067 i0 87.5 414.417670682731 240 28 96 2 9 247 125766 125528 Candidate division SR1 bacterium RAAC1_SR1_1 chromosome, complete genome blastn 103190 276 1 Bacteria Bacteria candidate phyla   Candidatus Absconditibacteriota         candidate division SR1 bacterium RAAC1_SR1_1
8953413 8953413 PRJEB29441_P_NODE_22448_length_223_cov_1.718391_g22007_i0 PRJEB29441 22448 223 1.718391 3.83201193 Candidatus Phycocordibacter aenigmaticus 1948796 Bacteria Bacteria 263 8.4e-66   NTclustered gi|2862534145|gb|CP174359.1| 1948796 g22007 i0 88.288 58.7488789237668 222 22 98 2 1 218 75448 75669 MAG: Patescibacteria group bacterium UBA2163 chromosome, complete genome blastn 13101 263 1 Bacteria Bacteria candidate phyla   Minisyncoccota Minisyncoccia Candidatus Phycocordibacterales Candidatus Phycocordibacteraceae Candidatus Phycocordibacter Candidatus Phycocordibacter aenigmaticus
10229109 10229109 PRJEB29441_P_NODE_17369_length_258_cov_5.023923_g16928_i0 PRJEB29441 17369 258 5.023923 12.96172134 Candidatus Saccharibacteria bacterium TM7i 2980174 Bacteria Bacteria 431 2.58e-116   NTclustered gi|2306681518|gb|CP075337.1| 2980174 g16928 i0 96.887 252.895348837209 257 8 99 0 1 257 667790 667534 Candidatus Saccharibacteria bacterium TM7i chromosome, complete genome blastn 65247 431 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharibacteria bacterium TM7i
10229546 10229546 PRJEB29441_P_NODE_41949_length_165_cov_0.879310_g41508_i0 PRJEB29441 41949 165 0.87931 1.4508615 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 206 1e-48   NTclustered gi|2814788338|emb|OY761159.2| 2838779 g41508 i0 91.837 47.6 147 12 89 0 19 165 3737935 3738081 MAG: Candidatus Binatia bacterium isolate a3054953-5fa8-48fb-90a5-e173aac96f7a genome assembly, chromosome: 1 blastn 7854 206 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
10229599 10229599 PRJEB29441_P_NODE_45769_length_162_cov_0.902655_g45328_i0 PRJEB29441 45769 162 0.902655 1.4623011 Candidatus Nomurabacteria bacterium 2052152 Bacteria Bacteria 93.5 7.94e-15   NTclustered gi|1958002018|gb|CP064958.1| 2052152 g45328 i0 92.424 0.783950617283951 66 4 41 1 97 162 602259 602195 MAG: Candidatus Nomurabacteria bacterium isolate AalW_18-Q3-R10-53_BAT3C.395 chromosome, complete genome blastn 127 93.5 1 Bacteria Bacteria candidate phyla   Candidatus Nomuraibacteriota         Candidatus Nomurabacteria bacterium
16603093 16603093 PRJEB29441_P_NODE_14674_length_285_cov_3.241525_g14233_i0 PRJEB29441 14674 285 3.241525 9.23834625 Candidatus Peribacteria bacterium 2053688 Bacteria Bacteria 416 8.1e-112   NTclustered gi|2258833497|gb|CP060226.1| 2053688 g14233 i0 93.007 175.364912280702 286 19 100 1 1 285 812207 812492 MAG: Candidatus Peribacteria bacterium isolate HK-STAS-PATE-10 chromosome, complete genome blastn 49979 416 1 Bacteria Bacteria candidate phyla   Candidatus Peregrinibacteriota Candidatus Peribacteria       Candidatus Peribacteria bacterium
16603112 16603112 PRJEB29441_P_NODE_15534_length_276_cov_1.797357_g15093_i0 PRJEB29441 15534 276 1.797357 4.96070532 Candidatus Peribacteria bacterium 2053688 Bacteria Bacteria 303 6.35e-78   NTclustered gi|2225492643|gb|CP082927.1| 2053688 g15093 i0 88.446 535.474637681159 251 29 91 0 24 274 194878 195128 MAG: Candidatus Peribacteria bacterium isolate LakeFargette_0920_ALND_MAG_52_24 chromosome, complete genome blastn 147791 303 1 Bacteria Bacteria candidate phyla   Candidatus Peregrinibacteriota Candidatus Peribacteria       Candidatus Peribacteria bacterium
19151939 19151939 PRJEB29441_P_NODE_23216_length_219_cov_1.800000_g22775_i0 PRJEB29441 23216 219 1.8 3.942 Candidatus Phycocordibacter aenigmaticus 1948796 Bacteria Bacteria 213 8.4e-51   NTclustered gi|2862534145|gb|CP174359.1| 1948796 g22775 i0 84.475 44.3561643835616 219 30 100 4 1 219 76759 76545 MAG: Patescibacteria group bacterium UBA2163 chromosome, complete genome blastn 9714 213 1 Bacteria Bacteria candidate phyla   Minisyncoccota Minisyncoccia Candidatus Phycocordibacterales Candidatus Phycocordibacteraceae Candidatus Phycocordibacter Candidatus Phycocordibacter aenigmaticus
19152311 19152311 PRJEB29441_P_NODE_45576_length_162_cov_0.902655_g45135_i0 PRJEB29441 45576 162 0.902655 1.4623011 Vermiphilus pyriformis 1763547 Bacteria Bacteria 115 1.7e-21   NTclustered gi|2207817285|gb|CP074345.1| 1763547 g45135 i0 87.879 5.84567901234568 99 10 60 2 1 98 974493 974396 MAG: Vermiphilus pyriformis isolate TW-EDP1-1 chromosome, complete genome blastn 947 115 1 Bacteria Bacteria candidate phyla           Vermiphilus Vermiphilus pyriformis
20427190 20427190 PRJEB29441_P_NODE_27197_length_201_cov_1.947368_g26756_i0 PRJEB29441 27197 201 1.947368 3.91420968 Candidatus Peribacteria bacterium 2053688 Bacteria Bacteria 182 2.1399999999999996e-41   NTclustered gi|2225492643|gb|CP082927.1| 2053688 g26756 i0 93.548 1.07960199004975 124 4 61 3 4 125 194139 194018 MAG: Candidatus Peribacteria bacterium isolate LakeFargette_0920_ALND_MAG_52_24 chromosome, complete genome blastn 217 182 1 Bacteria Bacteria candidate phyla   Candidatus Peregrinibacteriota Candidatus Peribacteria       Candidatus Peribacteria bacterium
25214244 25214244 PRJEB29441_P_NODE_14220_length_291_cov_1.603306_g13779_i0 PRJEB29441 14220 291 1.603306 4.66562046 Candidatus Nanosynbacter 2093823 Bacteria Bacteria 481 2.899999999999999e-131   NTclustered gi|1842054184|gb|CP039999.1| 713059 g13779 i0 96.564 83.2783505154639 291 8 100 1 1 291 143535 143823 Candidatus Saccharibacteria bacterium oral taxon 488 strain CM001 chromosome, complete genome blastn 24234 481 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharibacteria bacterium oral taxon 488
26780164 26780164 PRJEB29441_P_NODE_45381_length_162_cov_0.902655_g44940_i0 PRJEB29441 45381 162 0.902655 1.4623011 Candidatus Amesbacteria bacterium RIFCSPHIGHO2_ 1932011 Bacteria Bacteria 83.2 6.2e-17   NR OGC91774.1 1797253 g44940 i0 69.8 0.981481481481482 53 16 98.1 0 2 160 139 191 OGC91774.1 MAG: hypothetical protein A2876_01550 [Candidatus Amesbacteria bacterium RIFCSPHIGHO2_01_FULL_48_32b] diamond 159 83.2 1 Bacteria Bacteria candidate phyla   Candidatus Amesiibacteriota         Candidatus Amesbacteria bacterium RIFCSPHIGHO2_01_FULL_48_32b
26811775 26811775 PRJEB29441_P_NODE_45141_length_162_cov_1.557522_g44700_i0 PRJEB29441 45141 162 1.557522 2.52318564 Candidatus Dojkabacteria bacterium 2099670 Bacteria Bacteria 49.7 5.48e-6   NR HRN86952.1 2099670 g44700 i0 88 0.462962962962963 25 3 46.3 0 39 113 10 34 HRN86952.1 hypothetical protein [Candidatus Dojkabacteria bacterium] diamond 75 49.7 1 Bacteria Bacteria candidate phyla             Candidatus Dojkabacteria bacterium
26875354 26875354 PRJEB29441_P_NODE_44281_length_163_cov_0.894737_g43840_i0 PRJEB29441 44281 163 0.894737 1.45842131 Candidatus Elulimicrobium humile 2802965 Bacteria Bacteria 64.3 2.72e-10   NR NBP59149.1 2802965 g43840 i0 54.7 0.975460122699387 53 24 97.5 0 162 4 145 197 NBP59149.1 hypothetical protein [Candidatus Elulimicrobium humile] diamond 159 64.3 1 Bacteria Bacteria candidate phyla   Candidatus Elulimicrobiota Candidatus Elulimicrobia Candidatus Elulimicrobiales Candidatus Elulimicrobiaceae Candidatus Elulimicrobium Candidatus Elulimicrobium humile
26938179 26938179 PRJEB29441_P_NODE_42122_length_165_cov_0.879310_g41681_i0 PRJEB29441 42122 165 0.87931 1.4508615 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 57.8 8.03e-9   NR MCA9330407.1 2026720 g41681 i0 53.8 0.945454545454545 52 23 92.7 1 3 155 45 96 MCA9330407.1 hypothetical protein [Candidatus Saccharibacteria bacterium] diamond 156 57.8 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
27343061 27343061 PRJEB29441_P_NODE_46203_length_162_cov_0.902655_g45762_i0 PRJEB29441 46203 162 0.902655 1.4623011 Candidatus Saccharimonadota 95818 Bacteria Bacteria 102 9.04e-24   NR RKW02091.1 1917697 g45762 i0 92.6 9 54 4 100 0 1 162 88 141 RKW02091.1 MAG: DUF87 domain-containing protein, partial [Candidatus Saccharimonas sp.] diamond 1458 102 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia Candidatus Saccharimonadales Candidatus Saccharimonadaceae Candidatus Saccharimonas Candidatus Saccharimonas sp.
28486051 28486051 PRJEB29441_P_NODE_45427_length_162_cov_0.902655_g44986_i0 PRJEB29441 45427 162 0.902655 1.4623011 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 58.5 3.24e-8   NR HEY7559028.1 2838779 g44986 i0 47.2 0.981481481481482 53 28 98.1 0 161 3 175 227 HEY7559028.1 ATP-binding protein [Candidatus Binatia bacterium] diamond 159 58.5 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
29180857 29180857 PRJEB29441_P_NODE_35249_length_176_cov_1.259843_g34808_i0 PRJEB29441 35249 176 1.259843 2.21732368 Minisyncoccota bacterium 2053589 Bacteria Bacteria 56.2 1.68e-7   NR HVY72917.1 2053589 g34808 i0 96.6 0.494318181818182 29 1 49.4 0 85 171 1 29 HVY72917.1 thioredoxin domain-containing protein [Candidatus Paceibacterota bacterium] diamond 87 56.2 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
29710526 29710526 PRJEB29441_P_NODE_41930_length_165_cov_0.879310_g41489_i0 PRJEB29441 41930 165 0.87931 1.4508615 Bacteria 2 Bacteria Bacteria 55.5 3.9e-7   NR HAM56058.1 2053607 g41489 i0 93.3 4.90909090909091 30 2 54.5 0 1 90 158 187 HAM56058.1 phage recombination protein Bet [Candidatus Rokuibacteriota bacterium] diamond 810 55.5 1 Bacteria Bacteria candidate phyla   Candidatus Rokuibacteriota         Candidatus Rokuibacteriota bacterium
30475700 30475700 PRJEB29441_P_NODE_47173_length_161_cov_0.910714_g46732_i0 PRJEB29441 47173 161 0.910714 1.46624954 Patescibacteria group bacterium 2052139 Bacteria Bacteria 76.6 3.24e-15   NR MCL5667330.1 2052139 g46732 i0 66.7 0.950310559006211 51 17 95 0 154 2 15 65 MCL5667330.1 hypothetical protein [Patescibacteria group bacterium] diamond 153 76.6 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium
31834709 31834709 PRJEB29441_P_NODE_46517_length_161_cov_1.562500_g46076_i0 PRJEB29441 46517 161 1.5625 2.515625 Patescibacteria group bacterium 2052139 Bacteria Bacteria 87 1.2e-19   NR MEK7228061.1 2052139 g46076 i0 89.8 1.82608695652174 49 5 91.3 0 6 152 143 191 MEK7228061.1 Holliday junction branch migration protein RuvA [Patescibacteria group bacterium] diamond 294 87 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium
31929739 31929739 PRJEB29441_P_NODE_40297_length_166_cov_0.871795_g39856_i0 PRJEB29441 40297 166 0.871795 1.4471797 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 95.9 1.14e-22   NR MBP6981164.1 2044595 g39856 i0 80 0.993975903614458 55 11 99.4 0 166 2 6 60 MBP6981164.1 50S ribosomal protein L1 [Candidatus Altimarinota bacterium] diamond 165 95.9 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
32246551 32246551 PRJEB29441_P_NODE_40298_length_166_cov_0.871795_g39857_i0 PRJEB29441 40298 166 0.871795 1.4471797 Candidatus Uhrbacteria bacterium 2053634 Bacteria Bacteria 59.7 1.37e-8   NR MCR4314185.1 2053634 g39857 i0 59.1 0.795180722891566 44 18 79.5 0 133 2 133 176 MCR4314185.1 DEAD/DEAH box helicase [Candidatus Uhrbacteria bacterium] diamond 132 59.7 1 Bacteria Bacteria candidate phyla   Candidatus Uhriibacteriota         Candidatus Uhrbacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;