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contig_metadata

23 rows where bioproject = "PRJEB2925", tax_kingdom = "Bacillati" and tax_phylum = "Chloroflexota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Chloroflexota · 23 ✖

tax_kingdom 1

  • Bacillati · 23 ✖

bioproject 1

  • PRJEB2925 · 23 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1300364 1300364 PRJEB2925_P_NODE_16422_length_242_cov_2.125604_g15144_i0 PRJEB2925 16422 242 2.125604 5.14396168 Chloroflexia bacterium 2448782 Bacteria Bacteria 111 1.14e-28   NR MBA2518035.1 2448782 g15144 i0 65.8 0.979338842975207 79 27 97.9 0 2 238 60 138 MBA2518035.1 TetR/AcrR family transcriptional regulator [Chloroflexia bacterium] diamond 237 111 1 Bacteria   Bacillati Chloroflexota Chloroflexia       Chloroflexia bacterium
5128467 5128467 PRJEB2925_P_NODE_15545_length_254_cov_1.232877_g14267_i0 PRJEB2925 15545 254 1.232877 3.13150758 Litorilinea aerophila 1204385 Bacteria Bacteria 327 3.42e-85   NTclustered gi|393193706|gb|JQ733906.1| 1204385 g14267 i0 90.119 117.803149606299 253 23 99 2 3 254 3725 3474 Litorilinea aerophila strain PRI-4131 small subunit ribosomal RNA, tRNA-Ile (trnI), and large subunit ribosomal RNA genes, complete sequence blastn 29922 327 1 Bacteria   Bacillati Chloroflexota Caldilineae Caldilineales Caldilineaceae Litorilinea Litorilinea aerophila
9916244 9916244 PRJEB2925_P_NODE_14188_length_272_cov_2.400844_g12910_i0 PRJEB2925 14188 272 2.400844 6.53029568 Chloroflexota bacterium 2026724 Bacteria Bacteria 159 1.0699999999999999e-43   NR MDP9375399.1 2026724 g12910 i0 90 1.98529411764706 90 9 99.3 0 270 1 303 392 MDP9375399.1 FAD-dependent oxidoreductase [Chloroflexota bacterium] diamond 540 159 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
12779652 12779652 PRJEB2925_P_NODE_15771_length_251_cov_1.296296_g14493_i0 PRJEB2925 15771 251 1.296296 3.25370296 Chloroflexota bacterium 2026724 Bacteria Bacteria 161 1.46e-44   NR MDP9370997.1 2026724 g14493 i0 96.3 3.93227091633466 81 3 96.8 0 247 5 393 473 MDP9370997.1 threonine--tRNA ligase [Chloroflexota bacterium] diamond 987 161 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
16290748 16290748 PRJEB2925_P_NODE_15133_length_259_cov_4.223214_g13855_i0 PRJEB2925 15133 259 4.223214 10.93812426 Bacillati 1783272 Bacteria Bacteria 106 1.79e-18   NTclustered gi|470481958|ref|NR_076505.1| 357808 g13855 i0 86.735 183.803088803089 98 9 37 4 51 146 249 154 Roseiflexus sp. RS-1 strain RS-1 23S ribosomal RNA, complete sequence blastn 47605 106 1 Bacteria   Bacillati Chloroflexota Chloroflexia Chloroflexales Roseiflexaceae Roseiflexus Roseiflexus sp. RS-1
16602893 16602893 PRJEB2925_P_NODE_15334_length_257_cov_1.441441_g14056_i0 PRJEB2925 15334 257 1.441441 3.70450337 Chloroflexota bacterium 2026724 Bacteria Bacteria 72 6.71e-13   NR MBV8085423.1 2026724 g14056 i0 73.9 0.536964980544747 46 12 53.7 0 118 255 1 46 MBV8085423.1 CehA/McbA family metallohydrolase [Chloroflexota bacterium] diamond 138 72 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
20426804 20426804 PRJEB2925_P_NODE_16337_length_243_cov_3.264423_g15059_i0 PRJEB2925 16337 243 3.264423 7.93254789 uncultured Chloroflexia bacterium 1672391 Bacteria Bacteria 104 5.96e-18   NTclustered gi|2874254132|emb|OY970217.1| 1672391 g15059 i0 91.026 7.77366255144033 78 6 32 1 1 78 3523522 3523598 MAG: uncultured Chloroflexia bacterium isolate MFD05684.bin.1.130 genome assembly, chromosome: 1 blastn 1889 104 1 Bacteria   Bacillati Chloroflexota Chloroflexia       uncultured Chloroflexia bacterium
22978026 22978026 PRJEB2925_P_NODE_11359_length_328_cov_2.017065_g10084_i0 PRJEB2925 11359 328 2.017065 6.6159732 Chloroflexota bacterium 2026724 Bacteria Bacteria 176 1.71e-53   NR MDP9310114.1 2026724 g10084 i0 76.1 1.99390243902439 109 26 99.7 0 327 1 10 118 MDP9310114.1 AAA family ATPase [Chloroflexota bacterium] diamond 654 176 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
22978029 22978029 PRJEB2925_P_NODE_11579_length_323_cov_1.000000_g10304_i0 PRJEB2925 11579 323 1 3.23 Chloroflexota bacterium 2026724 Bacteria Bacteria 154 1.8199999999999998e-43   NR RIK38072.1 2026724 g10304 i0 67.3 0.993808049535604 107 35 99.4 0 1 321 105 211 RIK38072.1 MAG: iron ABC transporter permease [Chloroflexota bacterium] diamond 321 154 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
22978062 22978062 PRJEB2925_P_NODE_14139_length_273_cov_1.844538_g12861_i0 PRJEB2925 14139 273 1.844538 5.03558874 uncultured Chloroflexia bacterium 1672391 Bacteria Bacteria 102 2.45e-17   NTclustered gi|2874253860|emb|OY969916.1| 1672391 g12861 i0 84.259 1.66666666666667 108 13 39 4 1 107 1333838 1333734 MAG: uncultured Chloroflexia bacterium isolate MFD01916.bin.3.39 genome assembly, chromosome: 1 blastn 455 102 1 Bacteria   Bacillati Chloroflexota Chloroflexia       uncultured Chloroflexia bacterium
26811766 26811766 PRJEB2925_P_NODE_15541_length_254_cov_1.315068_g14263_i0 PRJEB2925 15541 254 1.315068 3.34027272 Chloroflexota bacterium 2026724 Bacteria Bacteria 57.8 7.56e-8   NR TME31709.1 2026724 g14263 i0 57.1 0.496062992125984 42 18 49.6 0 128 253 18 59 TME31709.1 MAG: methyltransferase domain-containing protein, partial [Chloroflexota bacterium] diamond 126 57.8 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
27184633 27184633 PRJEB2925_P_NODE_16282_length_244_cov_2.086124_g15004_i0 PRJEB2925 16282 244 2.086124 5.09014256 Bacillati 1783272 Bacteria Bacteria 63.2 2.38e-9   NR MCB9418910.1 2614247 g15004 i0 64.2 1.84426229508197 53 14 59 1 244 101 464 516 MCB9418910.1 alpha/beta hydrolase [Ardenticatenaceae bacterium] diamond 450 63.2 1 Bacteria   Bacillati Chloroflexota Ardenticatenia Ardenticatenales Ardenticatenaceae   Ardenticatenaceae bacterium
27381098 27381098 PRJEB2925_P_NODE_16063_length_247_cov_1.891509_g14785_i0 PRJEB2925 16063 247 1.891509 4.67202723 Chloroflexia bacterium 2448782 Bacteria Bacteria 44.7 0.00285   NR HEX6605921.1 2448782 g14785 i0 67.9 0.668016194331984 28 9 34 0 246 163 78 105 HEX6605921.1 VOC family protein [Chloroflexia bacterium] diamond 165 44.7 1 Bacteria   Bacillati Chloroflexota Chloroflexia       Chloroflexia bacterium
27697035 27697035 PRJEB2925_P_NODE_13884_length_277_cov_1.169421_g12606_i0 PRJEB2925 13884 277 1.169421 3.23929617 Dehalococcoidia bacterium 2026734 Bacteria Bacteria 153 1.7799999999999994e-42   NR HEY7293479.1 2026734 g12606 i0 83.7 2.98916967509025 92 15 99.6 0 1 276 150 241 HEY7293479.1 hypothetical protein [Dehalococcoidia bacterium] diamond 828 153 1 Bacteria   Bacillati Chloroflexota Dehalococcoidia       Dehalococcoidia bacterium
28801583 28801583 PRJEB2925_P_NODE_7708_length_452_cov_1.868106_g6505_i0 PRJEB2925 7708 452 1.868106 8.44383912 Caldilineaceae bacterium 2614250 Bacteria Bacteria 171 7.28e-48   NR MCB0095845.1 2614250 g6505 i0 60.4 0.988938053097345 149 56 97.6 3 442 2 11 158 MCB0095845.1 TraM recognition domain-containing protein [Caldilineaceae bacterium] diamond 447 171 1 Bacteria   Bacillati Chloroflexota Caldilineae Caldilineales Caldilineaceae   Caldilineaceae bacterium
29528057 29528057 PRJEB2925_P_NODE_16150_length_246_cov_1.625592_g14872_i0 PRJEB2925 16150 246 1.625592 3.99895632 Anaerolineae bacterium 2052143 Bacteria Bacteria 126 3.18e-32   NR HOU11745.1 2052143 g14872 i0 70.4 6.91463414634146 81 24 98.8 0 244 2 331 411 HOU11745.1 sulfatase [Anaerolineae bacterium] diamond 1701 126 1 Bacteria   Bacillati Chloroflexota Anaerolineae       Anaerolineae bacterium
29748713 29748713 PRJEB2925_P_NODE_711_length_4157_cov_5.362931_g541_i0 PRJEB2925 711 4157 5.362931 222.93704167 Chloroflexota bacterium 2026724 Bacteria Bacteria 293 1.05e-84   NR MDP9374897.1 2026724 g541 i0 48.2 0.26052441664662 361 170 25.2 4 2989 4035 11 366 MDP9374897.1 protein rep [Chloroflexota bacterium] diamond 1083 293 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
31859852 31859852 PRJEB2925_P_NODE_11537_length_324_cov_1.384083_g10262_i0 PRJEB2925 11537 324 1.384083 4.48442892 Bacteria 2 Bacteria Bacteria 188 5.3800000000000006e-58   NR MFN8515805.1 2448782 g10262 i0 97.9 1.78703703703704 97 2 89.8 0 323 33 132 228 MFN8515805.1 response regulator transcription factor [Chloroflexia bacterium] diamond 579 188 1 Bacteria   Bacillati Chloroflexota Chloroflexia       Chloroflexia bacterium
31859853 31859853 PRJEB2925_P_NODE_13037_length_292_cov_1.712062_g11760_i0 PRJEB2925 13037 292 1.712062 4.99922104 Bacteria 2 Bacteria Bacteria 181 3.72e-51   NR MFN8513264.1 2448782 g11760 i0 85.4 1.97260273972603 96 14 98.6 0 290 3 563 658 MFN8513264.1 hypothetical protein [Chloroflexia bacterium] diamond 576 181 1 Bacteria   Bacillati Chloroflexota Chloroflexia       Chloroflexia bacterium
31993057 31993057 PRJEB2925_P_NODE_15418_length_256_cov_1.266968_g14140_i0 PRJEB2925 15418 256 1.266968 3.24343808 Chloroflexales bacterium 2725990 Bacteria Bacteria 130 3.8e-33   NR MBC8075354.1 2725990 g14140 i0 72.9 0.99609375 85 23 99.6 0 256 2 261 345 MBC8075354.1 hypothetical protein [Chloroflexales bacterium] diamond 255 130 1 Bacteria   Bacillati Chloroflexota Chloroflexia Chloroflexales     Chloroflexales bacterium
32049806 32049806 PRJEB2925_P_NODE_13858_length_277_cov_2.041322_g12580_i0 PRJEB2925 13858 277 2.041322 5.65446194 Ktedonosporobacter 2692417 Bacteria Bacteria 89 1.81e-20   NR MBV9792236.1 2026724 g12580 i0 56 2.72924187725632 91 35 97.5 2 270 1 18 104 MBV9792236.1 acyltransferase family protein [Chloroflexota bacterium] diamond 756 89 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
32214612 32214612 PRJEB2925_P_NODE_14958_length_262_cov_1.233480_g13680_i0 PRJEB2925 14958 262 1.23348 3.2317176 Chloroflexota bacterium 2026724 Bacteria Bacteria 92.8 5.86e-20   NR MDP9372867.1 2026724 g13680 i0 73.7 1.24809160305344 57 15 65.3 0 6 176 339 395 MDP9372867.1 CoA transferase [Chloroflexota bacterium] diamond 327 92.8 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
32499566 32499566 PRJEB2925_P_NODE_15619_length_253_cov_1.467890_g14341_i0 PRJEB2925 15619 253 1.46789 3.7137617 Ktedonobacterales bacterium 2306968 Bacteria Bacteria 90.5 6.74e-19   NR HEY7984741.1 2306968 g14341 i0 54.8 2.96442687747036 84 36 99.6 1 252 1 620 701 HEY7984741.1 galactose oxidase-like domain-containing protein [Ktedonobacterales bacterium] diamond 750 90.5 1 Bacteria   Bacillati Chloroflexota Ktedonobacteria Ktedonobacterales     Ktedonobacterales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;