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contig_metadata

11 rows where bioproject = "PRJEB2925" and tax_clade = "core chlorophytes"

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analysis 2

tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • core chlorophytes · 11 ✖

bioproject 1

  • PRJEB2925 · 11 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2575960 2575960 PRJEB2925_P_NODE_16683_length_237_cov_2.014851_g15405_i0 PRJEB2925 16683 237 2.014851 4.77519687 Symbiochloris irregularis 706552 Plants Plants 126 8.360000000000001e-36   NR KAK9808445.1 706552 g15405 i0 74.7 2.87341772151899 75 19 94.9 0 236 12 20 94 KAK9808445.1 hypothetical protein WJX73_006634 [Symbiochloris irregularis] diamond 681 126 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Symbiochloris Symbiochloris irregularis
8641230 8641230 PRJEB2925_P_NODE_10587_length_349_cov_2.595541_g9315_i0 PRJEB2925 10587 349 2.595541 9.05843809 Trebouxia sp. C 2796353 Plants Plants 99.8 6.27e-25   NR KAL0020376.1 2905654 g9315 i0 71.2 1.89111747851003 73 19 62.8 1 13 231 1 71 KAL0020376.1 hypothetical protein WJX79_009890 [Trebouxia sp. C0005] diamond 660 99.8 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Trebouxia Trebouxia sp. C0005
12779669 12779669 PRJEB2925_P_NODE_17051_length_227_cov_2.489583_g15773_i0 PRJEB2925 17051 227 2.489583 5.65135341 Monoraphidium neglectum 145388 Plants Plants 254 5.16e-63   NTclustered gi|926795717|ref|XM_014050538.1| 145388 g15773 i0 86.842 84.9383259911894 228 28 100 2 1 227 346 120 Monoraphidium neglectum 40S ribosomal protein S20-1 mRNA blastn 19281 254 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Selenastraceae Monoraphidium Monoraphidium neglectum
14054271 14054271 PRJEB2925_P_NODE_3612_length_750_cov_2.797203_g2775_i0 PRJEB2925 3612 750 2.797203 20.9790225 Chlorella variabilis 554065 Plants Plants 593 9.959999999999998e-165   NTclustered gi|552822727|ref|XM_005846130.1| 554065 g2775 i0 81.266 51.544 758 120 99 19 1 747 927 181 Chlorella variabilis ATP/ADP translocator (CHLNCDRAFT_136213) mRNA, complete cds blastn 38658 593 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella variabilis
15015988 15015988 PRJEB2925_P_NODE_8832_length_406_cov_19.711590_g7572_i0 PRJEB2925 8832 406 19.71159 80.0290554 Eukaryota 2759 Plants Plants 721 0   NTclustered gi|1898545223|gb|MT951391.1| 3078 g7572 i0 98.768 100.002463054187 406 4 100 1 1 406 957 553 Auxenochlorella pyrenoidosa strain Ozcimen001 small subunit ribosomal RNA gene, partial sequence blastn 40601 726 0.993112947658402 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Auxenochlorella Auxenochlorella pyrenoidosa
21702796 21702796 PRJEB2925_P_NODE_11658_length_321_cov_1.636364_g10383_i0 PRJEB2925 11658 321 1.636364 5.25272844 Eukaryota 2759 Plants Plants 94 9.89e-20   NR PRW60925.1 3076 g10383 i0 90 12.1495327102804 50 5 46.7 0 152 3 512 561 PRW60925.1 putative DNA primase large subunit [Chlorella sorokiniana] diamond 3900 94.7 0.992608236536431 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella sorokiniana
28328022 28328022 PRJEB2925_P_NODE_4526_length_647_cov_2.550654_g3576_i0 PRJEB2925 4526 647 2.550654 16.50273138 Derbesia sp. WEST4838 1847751 Plants Plants 103 2.789999999999999e-23   NR YP_009306319.1 1847751 g3576 i0 37.3 2.36012364760433 177 103 80.2 3 645 127 25 197 YP_009306319.1 hypothetical protein [Derbesia sp. WEST4838] diamond 1527 103 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Ulvophyceae Bryopsidales Derbesiaceae Derbesia Derbesia sp. WEST4838
29212406 29212406 PRJEB2925_P_NODE_10189_length_360_cov_3.963077_g8917_i0 PRJEB2925 10189 360 3.963077 14.2670772 Dunaliella salina 3046 Plants Plants 89.4 1.57e-20   NR KAF5840039.1 3046 g8917 i0 68.4 1.425 57 18 47.5 0 2 172 4 60 KAF5840039.1 ribosomal protein L37a component of cytosolic 80S ribosome and 60S large subunit [Dunaliella salina] diamond 513 89.4 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Dunaliellaceae Dunaliella Dunaliella salina
31771586 31771586 PRJEB2925_P_NODE_10257_length_358_cov_5.120743_g8985_i0 PRJEB2925 10257 358 5.120743 18.33225994 Raphidocelis subcapitata 307507 Plants Plants 135 9.55e-38   NR GBF93448.1 307507 g8985 i0 79.1 20.3296089385475 86 17 72.1 1 85 342 47 131 GBF93448.1 ribosomal protein S1 [Raphidocelis subcapitata] diamond 7278 135 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Selenastraceae Raphidocelis Raphidocelis subcapitata
31834697 31834697 PRJEB2925_P_NODE_7217_length_473_cov_8.299087_g6048_i0 PRJEB2925 7217 473 8.299087 39.25468151 Pedinophyceae sp. YPF-7 765719 Plants Plants 100 7.71e-24   NR CAG9460866.1 765719 g6048 i0 47.3 0.830866807610994 131 53 83.1 1 452 60 8 122 CAG9460866.1 unnamed protein product [Pedinophyceae sp. YPF-701] diamond 393 100 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Pedinophyceae       Pedinophyceae sp. YPF-701
31993060 31993060 PRJEB2925_P_NODE_7358_length_468_cov_2.697460_g6181_i0 PRJEB2925 7358 468 2.69746 12.6241128 [Myrmecia] bisecta 41462 Plants Plants 167 5.34e-49   NR KAK9817933.1 41462 g6181 i0 60.8 2.74358974358974 143 54 90.4 1 8 430 63 205 KAK9817933.1 hypothetical protein WJX72_004502 [[Myrmecia] bisecta] diamond 1284 167 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Myrmecia [Myrmecia] bisecta

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;