RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJEB2925", tax_clade = "Metamonada" and tax_superkingdom = "Eukaryota"

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tax_phylum 2

analysis 2

tax_superkingdom 1

  • Eukaryota · 4 ✖

tax_clade 1

  • Metamonada · 4 ✖

bioproject 1

  • PRJEB2925 · 4 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6404250 6404250 PRJEB2925_P_NODE_11526_length_324_cov_1.820069_g10251_i0 PRJEB2925 11526 324 1.820069 5.89702356 Trichomonas vaginalis 5722 Parabasalia other_Eukaryota 65.8 3.91e-6   NTclustered gi|2319615616|ref|XR_007835995.1| 412133 g10251 i0 90.385 0.719135802469136 52 2 16 3 115 165 2561 2610 Trichomonas vaginalis G3 23S ribosomal RNA (TVAGG3_0034210), rRNA blastn 233 65.8 1 Eukaryota Metamonada   Parabasalia   Trichomonadida Trichomonadidae Trichomonas Trichomonas vaginalis
17877704 17877704 PRJEB2925_P_NODE_12595_length_300_cov_2.109434_g11318_i0 PRJEB2925 12595 300 2.109434 6.328302 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 171 1.65e-51   NR ESU42993.1 5741 g11318 i0 81.8 7.92 99 18 99 0 300 4 115 213 ESU42993.1 SSU ribosomal protein S17P [Giardia intestinalis] diamond 2376 171 1 Eukaryota Metamonada   Fornicata   Diplomonadida Hexamitidae Giardia Giardia duodenalis
26780148 26780148 PRJEB2925_P_NODE_11941_length_314_cov_2.767025_g10665_i0 PRJEB2925 11941 314 2.767025 8.6884585 Anaeramoeba flamelloides 1746091 Root_unresolved Root_unresolved 68.9 4.22e-11   NR KAJ6246377.1 1746091 g10665 i0 32.4 3.89808917197452 136 55 96.5 3 12 314 1 134 KAJ6246377.1 hypothetical protein M0813_19517 [Anaeramoeba flamelloides] diamond 1224 68.9 1 Eukaryota Metamonada         Anaeramoebidae Anaeramoeba Anaeramoeba flamelloides
29685507 29685507 PRJEB2925_P_NODE_7110_length_478_cov_5.196388_g5944_i0 PRJEB2925 7110 478 5.196388 24.83873464 Anaeramoeba flamelloides 1746091 Root_unresolved Root_unresolved 83.2 2.23e-16   NR KAJ3452455.1 1746091 g5944 i0 43.2 5.65481171548117 95 52 59.6 2 474 190 1 93 KAJ3452455.1 40S ribosomal protein S10 [Anaeramoeba flamelloides] diamond 2703 83.2 1 Eukaryota Metamonada         Anaeramoebidae Anaeramoeba Anaeramoeba flamelloides

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;