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contig_metadata

35 rows where bioproject = "PRJEB2925", tax_clade = "Discoba" and tax_phylum = "Euglenozoa"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Euglenozoa · 35 ✖

tax_clade 1

  • Discoba · 35 ✖

bioproject 1

  • PRJEB2925 · 35 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
988088 988088 PRJEB2925_P_NODE_16441_length_242_cov_1.492754_g15163_i0 PRJEB2925 16441 242 1.492754 3.61246468 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 272 1.5399999999999998e-68   NTclustered gi|116222222|gb|DQ980497.1| 312471 g15163 i0 87.66 97.4917355371901 235 28 97 1 1 234 586 352 Neobodo designis clone ndtua1 alpha tubulin gene, partial cds blastn 23593 272 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Neobodonida   Neobodo Neobodo designis
1300382 1300382 PRJEB2925_P_NODE_2842_length_898_cov_1.736964_g2149_i0 PRJEB2925 2842 898 1.736964 15.59793672 Leishmania braziliensis 5660 Euglenozoa other_Eukaryota 516 2.67e-141   NTclustered gi|2593259423|emb|OY748514.1| 5660 g2149 i0 78.147 78.7037861915368 842 162 92 19 71 898 1131674 1132507 Leishmania braziliensis isolate MHOM/BR/75/M2903 genome assembly, chromosome: 28 blastn 70676 516 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Leishmania Leishmania braziliensis
2576042 2576042 PRJEB2925_P_NODE_8603_length_416_cov_2.099738_g7357_i0 PRJEB2925 8603 416 2.099738 8.73491008 Decastava edaphica 1732396 Euglenozoa other_Eukaryota 734 0   NTclustered gi|937541987|gb|KP306753.1| 1732396 g7357 i0 98.558 48.40625 416 5 100 1 1 416 599 185 Decastava edaphica strain CCAP 1265/2 18S ribosomal RNA gene, partial sequence blastn 20137 734 1 Eukaryota Discoba   Euglenozoa Euglenida     Decastava Decastava edaphica
3852255 3852255 PRJEB2925_P_NODE_2244_length_1074_cov_69.801732_g1078_i1 PRJEB2925 2244 1074 69.801732 749.67060168 Petalomonas cantuscygni 56452 Euglenozoa other_Eukaryota 734 0   NTclustered gi|2228698|gb|U84731.1|PCU84731 56452 g1078 i1 91.76 45.4245810055866 534 35 55 7 403 935 1024 1549 Petalomonas cantuscygni small subunit ribosomal RNA gene, complete sequence blastn 48786 734 1 Eukaryota Discoba   Euglenozoa Euglenida Petalomonadida Scytomonadidae Petalomonas Petalomonas cantuscygni
3852303 3852303 PRJEB2925_P_NODE_6944_length_486_cov_3.955654_g5784_i0 PRJEB2925 6944 486 3.955654 19.22447844 Bodo saltans 75058 Euglenozoa other_Eukaryota 344 6.979999999999999e-90   NTclustered gi|206598117|gb|FJ168549.1| 75058 g5784 i0 86.228 30.6728395061728 334 26 68 8 1 330 2318 2635 Bodo saltans clone fosmid 16K02, complete sequence blastn 14907 344 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Eubodonida Bodonidae Bodo Bodo saltans
6091219 6091219 PRJEB2925_P_NODE_3625_length_748_cov_33.423562_g1254_i1 PRJEB2925 3625 748 33.423562 250.00824376 Kinetoplastea 5653 Euglenozoa other_Eukaryota 1133 0   NTclustered gi|41400289|gb|AY425025.1| 127150 g1254 i1 94 100.446524064171 750 41 100 4 1 748 2147 1400 Rhynchomonas nasuta 18S ribosomal RNA gene, partial sequence blastn 75134 1133 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Neobodonida Rhynchomonadidae Rhynchomonas Rhynchomonas nasuta
6404375 6404375 PRJEB2925_P_NODE_7566_length_457_cov_41.127962_g6375_i0 PRJEB2925 7566 457 41.127962 187.95478634 Trypanosoma theileri 67003 Euglenozoa other_Eukaryota 726 0   NTclustered gi|2026667531|dbj|LC618031.1| 67003 g6375 i0 95.248 149.135667396061 463 15 100 7 1 457 4811 4350 Trypanosoma theileri OSK-16 genes for 18S rRNA, ITS1, 5.8S rRNA, ITS2, 28S rRNA, ITS3, ITS4, partial and complete sequence blastn 68155 726 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma theileri
7365699 7365699 PRJEB2925_P_NODE_4186_length_679_cov_12.276398_g3271_i0 PRJEB2925 4186 679 12.276398 83.35674242 Peranema 3287 Euglenozoa other_Eukaryota 1160 0   NTclustered gi|1059792057|gb|AH005452.2| 56466 g3271 i0 97.637 29.6141384388807 677 9 99 1 3 679 2208 1539 Peranema trichophorum small subunit ribosomal RNA genes, partial sequence blastn 20108 1160 1 Eukaryota Discoba   Euglenozoa Euglenida Heteronematales Peranemidae Peranema Peranema trichophorum
7678422 7678422 PRJEB2925_P_NODE_927_length_2833_cov_19.032166_g703_i0 PRJEB2925 927 2833 19.032166 539.18126278 Peranema trichophorum 56466 Euglenozoa other_Eukaryota 2176 0   NTclustered gi|27461806|gb|AY130826.1| 56466 g703 i0 96.995 7.99152841510766 1298 34 46 5 57 1350 1 1297 Peranema trichophorum voucher Carolina Biol. Supp. Co. (CBS) CE 13-1838 large subunit ribosomal RNA gene, partial sequence blastn 22640 2176 1 Eukaryota Discoba   Euglenozoa Euglenida Heteronematales Peranemidae Peranema Peranema trichophorum
8641292 8641292 PRJEB2925_P_NODE_6987_length_484_cov_2.418708_g5826_i0 PRJEB2925 6987 484 2.418708 11.70654672 Trypanosomatidae 5654 Euglenozoa other_Eukaryota 388 3.1699999999999997e-103   NTclustered gi|1002452927|ref|XM_015800798.1| 157538 g5826 i0 86.479 35.2830578512397 355 47 73 1 7 360 891 1245 Leptomonas pyrrhocoris putative Ribosomal protein l3 mRNA blastn 17077 390 0.994871794871795 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Leptomonas Leptomonas pyrrhocoris
8953176 8953176 PRJEB2925_P_NODE_9508_length_382_cov_20.040346_g8238_i0 PRJEB2925 9508 382 20.040346 76.55412172 Petalomonas cantuscygni 56452 Euglenozoa other_Eukaryota 235 3.37e-57   NTclustered gi|118574972|gb|EF108310.1| 56452 g8238 i0 87.685 16.761780104712 203 23 53 1 180 382 235 35 Petalomonas cantuscygni strain CCAP 1259/1 large subunit ribosomal RNA (rnl) gene, partial sequence blastn 6403 235 1 Eukaryota Discoba   Euglenozoa Euglenida Petalomonadida Scytomonadidae Petalomonas Petalomonas cantuscygni
11191446 11191446 PRJEB2925_P_NODE_7989_length_440_cov_32.419753_g6771_i0 PRJEB2925 7989 440 32.419753 142.6469132 Trypanosomatidae 5654 Euglenozoa other_Eukaryota 516 1.26e-141   NTclustered gi|2414483|emb|Y00055.1| 5656 g6771 i0 87.719 137.079545454545 456 38 100 12 1 440 6234 6687 Crithidia fasciculata ribosomal DNA repeat (complete) blastn 60315 520 0.992307692307692 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Crithidia Crithidia fasciculata
11504187 11504187 PRJEB2925_P_NODE_4070_length_693_cov_21.765957_g3169_i0 PRJEB2925 4070 693 21.765957 150.83808201 Diplonema papillatum 91374 Euglenozoa other_Eukaryota 169 6.579999999999999e-37   NTclustered gi|560190589|gb|KF633467.1| 91374 g3169 i0 77.814 17.9365079365079 311 43 44 19 1 306 1315 1604 Diplonema papillatum strain ATCC 50162 28S ribosomal RNA gene, complete sequence blastn 12430 169 1 Eukaryota Discoba   Euglenozoa Diplonemea   Diplonemidae Diplonema Diplonema papillatum
11504206 11504206 PRJEB2925_P_NODE_5590_length_564_cov_15.570888_g4537_i0 PRJEB2925 5590 564 15.570888 87.81980832 Neobodo curvifilus 351716 Euglenozoa other_Eukaryota 691 0   NTclustered gi|197723535|gb|EF681919.2| 351716 g4537 i0 96.651 68.8794326241135 418 11 74 3 1 417 10 425 Neobodo curvifilus strain HFCC37 28S ribosomal RNA gene, partial sequence blastn 38848 691 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Neobodonida   Neobodo Neobodo curvifilus
12467183 12467183 PRJEB2925_P_NODE_17510_length_197_cov_9.888889_g16232_i0 PRJEB2925 17510 197 9.888889 19.48111133 Trypanosoma 5690 Euglenozoa other_Eukaryota 281 2e-71   NTclustered gi|162233|gb|M63699.1|TRBRGS1 5693 g16232 i0 92.424 119.598984771574 198 14 100 1 1 197 269 72 T.cruzi S3 ribosomal RNA gene blastn 23561 281 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma cruzi
14054321 14054321 PRJEB2925_P_NODE_7712_length_452_cov_1.712230_g6509_i0 PRJEB2925 7712 452 1.71223 7.7392796 Petalomonas cantuscygni 56452 Euglenozoa other_Eukaryota 182 6.49e-51   NR ABG77329.1 56452 g6509 i0 66.5 1.06858407079646 161 43 99.6 1 452 3 124 284 ABG77329.1 Hsp90, partial [Petalomonas cantuscygni] diamond 483 182 1 Eukaryota Discoba   Euglenozoa Euglenida Petalomonadida Scytomonadidae Petalomonas Petalomonas cantuscygni
15328278 15328278 PRJEB2925_P_NODE_3773_length_731_cov_18.123563_g2909_i0 PRJEB2925 3773 731 18.123563 132.48324553 Rhynchomonas nasuta 127150 Euglenozoa other_Eukaryota 1110 0   NTclustered gi|77994657|gb|DQ207595.1| 127150 g2909 i0 95.546 92.5335157318741 696 28 95 3 38 731 3 697 Rhynchomonas nasuta strain HFCC17 18S ribosomal RNA gene, partial sequence blastn 67642 1110 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Neobodonida Rhynchomonadidae Rhynchomonas Rhynchomonas nasuta
16602976 16602976 PRJEB2925_P_NODE_7734_length_451_cov_1.634615_g6531_i0 PRJEB2925 7734 451 1.634615 7.37211365 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 223 5.06e-71   NR QLA09565.1 3039 g6531 i0 77.6 51.19955654102 143 32 95.1 0 429 1 7 149 QLA09565.1 40S small subunit ribosomal protein uS3 [Euglena gracilis] diamond 23091 224 0.995535714285714 Eukaryota Discoba   Euglenozoa Euglenida Euglenales Euglenaceae Euglena Euglena gracilis
18839803 18839803 PRJEB2925_P_NODE_1975_length_1203_cov_13.511986_g1467_i0 PRJEB2925 1975 1203 13.511986 162.54919158 Kinetoplastea 5653 Euglenozoa other_Eukaryota 1506 0   NTclustered gi|59891965|gb|AY753625.1| 313291 g1467 i0 98.703 70.5261845386534 848 11 70 0 1 848 1246 399 Bodonidae sp. Pan2 18S ribosomal RNA gene, partial sequence blastn 84843 1506 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Eubodonida Bodonidae   Bodonidae sp. Pan2
19151662 19151662 PRJEB2925_P_NODE_4736_length_629_cov_1.910774_g3761_i0 PRJEB2925 4736 629 1.910774 12.01876846 Petalomonas cantuscygni 56452 Euglenozoa other_Eukaryota 283 2.61e-88   NR ABG77329.1 56452 g3761 i0 69.9 0.996820349761526 209 51 99.7 1 3 629 405 601 ABG77329.1 Hsp90, partial [Petalomonas cantuscygni] diamond 627 283 1 Eukaryota Discoba   Euglenozoa Euglenida Petalomonadida Scytomonadidae Petalomonas Petalomonas cantuscygni
20114592 20114592 PRJEB2925_P_NODE_3656_length_744_cov_34.523272_g1254_i2 PRJEB2925 3656 744 34.523272 256.85314368 Bodo 5712 Euglenozoa other_Eukaryota 1275 0   NTclustered gi|77994636|gb|DQ207574.1| 75058 g1254 i2 97.581 99.4771505376344 744 18 100 0 1 744 2107 1364 Bodo saltans strain HFCC311 18S ribosomal RNA gene, partial sequence blastn 74011 1275 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Eubodonida Bodonidae Bodo Bodo saltans
20426828 20426828 PRJEB2925_P_NODE_3717_length_737_cov_18.797721_g2863_i0 PRJEB2925 3717 737 18.797721 138.53920377 Bodo sp. ATCC 50149 155205 Euglenozoa other_Eukaryota 1264 0   NTclustered gi|20331091|gb|AY028449.1| 155205 g2863 i0 99.425 90.1845318860244 696 4 94 0 42 737 1 696 Bodo sp. ATCC 50149 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 66466 1264 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Eubodonida Bodonidae Bodo Bodo sp. ATCC 50149
21390238 21390238 PRJEB2925_P_NODE_14177_length_272_cov_3.506329_g12899_i0 PRJEB2925 14177 272 3.506329 9.53721488 Leishmania 5658 Euglenozoa other_Eukaryota 80.5 1.14e-10   NTclustered gi|440222381|gb|JX030049.1| 5659 g12899 i0 85.714 14.2904411764706 77 9 28 2 196 272 167 93 Leishmania amazonensis isolate LaPH8.rRNA.25 28S ribosomal RNA (LSU-beta), partial sequence blastn 3887 80.5 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Leishmania Leishmania amazonensis
21702902 21702902 PRJEB2925_P_NODE_7658_length_454_cov_1.892601_g6459_i0 PRJEB2925 7658 454 1.892601 8.59240854 Euglena gracilis 3039 Euglenozoa other_Eukaryota 261 3.26e-84   NR AAC99646.1 3039 g6459 i0 82 0.991189427312775 150 27 99.1 0 452 3 220 369 AAC99646.1 actin [Euglena gracilis] diamond 450 261 1 Eukaryota Discoba   Euglenozoa Euglenida Euglenales Euglenaceae Euglena Euglena gracilis
27216161 27216161 PRJEB2925_P_NODE_6382_length_516_cov_4.195426_g5261_i0 PRJEB2925 6382 516 4.195426 21.64839816 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 74.3 1.44e-13   NR KNH05339.1 1314962 g5261 i0 39.4 1.73255813953488 104 63 60.5 0 315 4 2 105 KNH05339.1 ribosomal protein L31 [Perkinsela sp. CCAP 1560/4] diamond 894 74.3 1 Eukaryota Discoba   Euglenozoa Kinetoplastea   Ichthyobodonidae Perkinsela Perkinsela sp. CCAP 1560/4
27697042 27697042 PRJEB2925_P_NODE_9924_length_369_cov_1.416168_g8652_i0 PRJEB2925 9924 369 1.416168 5.22565992 Angomonas deanei 59799 Euglenozoa other_Eukaryota 127 1e-34   NR EPY28045.1 59799 g8652 i0 61.2 1.96747967479675 121 43 95.1 2 356 6 26 146 EPY28045.1 histone H3 [Angomonas deanei] diamond 726 127 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Angomonas Angomonas deanei
28233178 28233178 PRJEB2925_P_NODE_16646_length_238_cov_1.768473_g15368_i0 PRJEB2925 16646 238 1.768473 4.20896574 Bodo saltans 75058 Euglenozoa other_Eukaryota 52.4 7.4e-6   NR CUG89236.1 75058 g15368 i0 100 0.315126050420168 25 0 31.5 0 75 1 117 141 CUG89236.1 60S ribosomal protein L18, putative [Bodo saltans] diamond 75 52.4 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Eubodonida Bodonidae Bodo Bodo saltans
28801580 28801580 PRJEB2925_P_NODE_16008_length_248_cov_1.126761_g14730_i0 PRJEB2925 16008 248 1.126761 2.79436728 Strigomonas culicis 28005 Euglenozoa other_Eukaryota 73.2 7.6e-13   NR EPY31750.1 28005 g14730 i0 44.3 1.8991935483871 79 44 95.6 0 237 1 682 760 EPY31750.1 heat shock protein 110kDa [Strigomonas culicis] diamond 471 73.2 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Strigomonas Strigomonas culicis
29243856 29243856 PRJEB2925_P_NODE_11109_length_334_cov_1.976589_g9835_i0 PRJEB2925 11109 334 1.976589 6.60180726 Euglena gracilis 3039 Euglenozoa other_Eukaryota 116 6.489999999999999e-31   NR QLA09628.1 3039 g9835 i0 51.4 0.94311377245509 105 50 93.4 1 315 4 1 105 QLA09628.1 60S large subunit ribosomal protein eL27 [Euglena gracilis] diamond 315 116 1 Eukaryota Discoba   Euglenozoa Euglenida Euglenales Euglenaceae Euglena Euglena gracilis
29528056 29528056 PRJEB2925_P_NODE_15010_length_261_cov_1.827434_g13732_i0 PRJEB2925 15010 261 1.827434 4.76960274 Euglena gracilis 3039 Euglenozoa other_Eukaryota 53.1 3.15e-7   NR QLA09639.1 3039 g13732 i0 79.3 0.333333333333333 29 6 33.3 0 9 95 1 29 QLA09639.1 60S large subunit ribosomal protein eL39 [Euglena gracilis] diamond 87 53.1 1 Eukaryota Discoba   Euglenozoa Euglenida Euglenales Euglenaceae Euglena Euglena gracilis
30444133 30444133 PRJEB2925_P_NODE_6393_length_516_cov_1.469854_g5272_i0 PRJEB2925 6393 516 1.469854 7.58444664 Bodo saltans 75058 Euglenozoa other_Eukaryota 288 1.51e-95   NR CUG87640.1 75058 g5272 i0 83.1 1.02906976744186 177 23 98.8 2 2 511 100 276 CUG87640.1 40S ribosomal protein S4, putative [Bodo saltans] diamond 531 288 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Eubodonida Bodonidae Bodo Bodo saltans
31259049 31259049 PRJEB2925_P_NODE_1815_length_1289_cov_10.440191_g1345_i0 PRJEB2925 1815 1289 10.440191 134.57406199 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 125 9.36e-31   NR KAJ9469984.1 91374 g1345 i0 55.4 0.514352211016292 112 45 24.9 2 1286 966 3 114 KAJ9469984.1 hypothetical protein DIPPA_35953 [Diplonema papillatum] diamond 663 125 1 Eukaryota Discoba   Euglenozoa Diplonemea   Diplonemidae Diplonema Diplonema papillatum
32024763 32024763 PRJEB2925_P_NODE_15478_length_255_cov_1.277273_g14200_i0 PRJEB2925 15478 255 1.277273 3.25704615 Trypanosoma rangeli 5698 Euglenozoa other_Eukaryota 43.1 0.00755   NR XP_029235543.1 5698 g14200 i0 29.2 1.67058823529412 72 51 84.7 0 26 241 13 84 XP_029235543.1 ribonucleoprotein p18, mitochondrial precursor, partial [Trypanosoma rangeli] diamond 426 43.1 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma rangeli
32246544 32246544 PRJEB2925_P_NODE_14118_length_273_cov_2.642857_g12840_i0 PRJEB2925 14118 273 2.642857 7.21499961 Strigomonas culicis 28005 Euglenozoa other_Eukaryota 117 2.4699999999999997e-30   NR EPY29430.1 28005 g12840 i0 67.4 2.85714285714286 86 28 94.5 0 273 16 124 209 EPY29430.1 heat shock protein 70 [Strigomonas culicis] diamond 780 117 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Strigomonas Strigomonas culicis
32839409 32839409 PRJEB2925_P_NODE_9480_length_383_cov_3.879310_g8210_i0 PRJEB2925 9480 383 3.87931 14.8577573 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 84.3 2.59e-17   NR XP_818671.1 5693 g8210 i0 41.8 7.7154046997389 122 65 95.6 2 367 2 76 191 XP_818671.1 translation elongation factor 1-beta, putative [Trypanosoma cruzi] diamond 2955 85.1 0.990599294947121 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma cruzi

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;