RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

8 rows where bioproject = "PRJEB28589" and tax_phylum = "Mucoromycota"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_phylum 1

  • Mucoromycota · 8 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB28589 · 8 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
25908 25908 PRJEB28589_S_NODE_13761_length_200_cov_1.790850_g13653_i0 PRJEB28589 13761 200 1.79085 3.5817 Cokeromyces recurvatus 90255 Fungi Fungi 156 1.29e-33   NTclustered gi|2324066034|ref|XM_051530809.1| 90255 g13653 i0 83.929 5.865 168 21 83 6 34 198 657 493 Cokeromyces recurvatus 60S ribosomal protein L18-B (BX663DRAFT_542306), partial mRNA blastn 1173 156 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mucoraceae Cokeromyces Cokeromyces recurvatus
1300250 1300250 PRJEB28589_S_NODE_4722_length_331_cov_3.176056_g4614_i0 PRJEB28589 4722 331 3.176056 10.51274536 Lobosporangium transversale 64571 Fungi Fungi 74.3 5.34e-15   NR KAF9905033.1 64571 g4614 i0 57.6 0.978851963746224 59 24 53.5 1 253 77 14 71 KAF9905033.1 hypothetical protein BX616_001107, partial [Lobosporangium transversale] diamond 324 74.3 1 Eukaryota Opisthokonta Fungi Mucoromycota Mortierellomycetes Mortierellales Mortierellaceae Lobosporangium Lobosporangium transversale
27191154 27191154 PRJEB28589_S_NODE_1442_length_460_cov_20.058111_g1338_i0 PRJEB28589 1442 460 20.058111 92.2673106 Podila verticillata NRRL 6337 1069443 Fungi Fungi 63.5 3.46e-9   NR KFH73954.1 1069443 g1338 i0 38.3 0.528260869565217 81 44 52.2 3 361 122 2 77 KFH73954.1 hypothetical protein MVEG_01167 [Podila verticillata NRRL 6337] diamond 243 63.5 1 Eukaryota Opisthokonta Fungi Mucoromycota Mortierellomycetes Mortierellales Mortierellaceae Podila Podila verticillata
27317892 27317892 PRJEB28589_S_NODE_4643_length_332_cov_9.547368_g4535_i0 PRJEB28589 4643 332 9.547368 31.69726176 Gongronella butleri 101105 Fungi Fungi 42 0.0388   NR KAI8058992.1 101105 g4535 i0 45.7 0.316265060240964 35 19 31.6 0 38 142 58 92 KAI8058992.1 hypothetical protein BC940DRAFT_338506, partial [Gongronella butleri] diamond 105 42 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Cunninghamellaceae Gongronella Gongronella butleri
28675589 28675589 PRJEB28589_S_NODE_2807_length_375_cov_11.832317_g2699_i0 PRJEB28589 2807 375 11.832317 44.37118875 Linnemannia elongata AG-77 1314771 Fungi Fungi 80.9 8.86e-17   NR OAQ29354.1 1314771 g2699 i0 54.4 0.544 68 25 54.4 2 171 374 58 119 OAQ29354.1 hypothetical protein K457DRAFT_125842 [Linnemannia elongata AG-77] diamond 204 80.9 1 Eukaryota Opisthokonta Fungi Mucoromycota Mortierellomycetes Mortierellales Mortierellaceae Linnemannia Linnemannia elongata
29275219 29275219 PRJEB28589_S_NODE_3289_length_361_cov_6.901274_g3181_i0 PRJEB28589 3289 361 6.901274 24.91359914 Parasitella parasitica 35722 Fungi Fungi 97.8 1.11e-22   NR CEP08224.1 35722 g3181 i0 55.8 3.06648199445983 86 31 65.7 2 274 38 105 190 CEP08224.1 hypothetical protein [Parasitella parasitica] diamond 1107 97.8 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mucoraceae Parasitella Parasitella parasitica
29395207 29395207 PRJEB28589_S_NODE_9209_length_259_cov_3.438679_g9101_i0 PRJEB28589 9209 259 3.438679 8.90617861 Mortierellaceae 4854 Fungi Fungi 43.1 0.031   NR KAF9152451.1 64567 g9101 i0 37.5 2.22393822393822 48 27 52.1 1 24 158 94 141 KAF9152451.1 hypothetical protein BG015_005247 [Linnemannia schmuckeri] diamond 576 43.1 1 Eukaryota Opisthokonta Fungi Mucoromycota Mortierellomycetes Mortierellales Mortierellaceae Linnemannia Linnemannia schmuckeri
32556425 32556425 PRJEB28589_S_NODE_8159_length_274_cov_7.149780_g8051_i0 PRJEB28589 8159 274 7.14978 19.5903972 Fungi 4751 Fungi Fungi 48.5 5.21e-4   NR KAG0336203.1 64523 g8051 i0 34.1 3.74452554744526 85 56 93.1 0 10 264 1301 1385 KAG0336203.1 hypothetical protein BG004_008161 [Podila humilis] diamond 1026 48.5 1 Eukaryota Opisthokonta Fungi Mucoromycota Mortierellomycetes Mortierellales Mortierellaceae Podila Podila humilis

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;