RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJEB28589", tax_kingdom = "Metazoa" and tax_phylum = "Rotifera"

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tax_superkingdom 1

tax_phylum 1

  • Rotifera · 2 ✖

tax_kingdom 1

  • Metazoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJEB28589 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
32056315 32056315 PRJEB28589_S_NODE_3678_length_351_cov_7.197368_g3570_i0 PRJEB28589 3678 351 7.197368 25.26276168 Rotaria sp. Silwood1 2762511 Rotifera other_Eukaryota 157 4.71e-46   NR CAF3949053.1 2762511 g3570 i0 64.5 0.914529914529915 107 36 91.5 1 347 27 97 201 CAF3949053.1 unnamed protein product, partial [Rotaria sp. Silwood1] diamond 321 157 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Rotaria Rotaria sp. Silwood1
32334901 32334901 PRJEB28589_S_NODE_12139_length_219_cov_1.883721_g12031_i0 PRJEB28589 12139 219 1.883721 4.12534899 Metazoa 33208 Rotifera other_Eukaryota 57.4 1.26e-7   NR CAF3674268.1 392032 g12031 i0 46.3 4.58904109589041 67 36 91.8 0 201 1 15 81 CAF3674268.1 unnamed protein product [Rotaria socialis] diamond 1005 57.8 0.993079584775087 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Rotaria Rotaria socialis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;