RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJEB28589", tax_kingdom = "Metazoa" and tax_phylum = "Echinodermata"

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tax_superkingdom 1

tax_phylum 1

  • Echinodermata · 2 ✖

tax_kingdom 1

  • Metazoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJEB28589 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28795036 28795036 PRJEB28589_S_NODE_9187_length_259_cov_4.938679_g9079_i0 PRJEB28589 9187 259 4.938679 12.79117861 Metazoa 33208 Echinodermata other_Eukaryota 85.1 4.3e-17   NR XP_033626612.1 7604 g9079 i0 76 5.66409266409266 50 11 56.8 1 111 257 17 66 XP_033626612.1 aspartate aminotransferase, mitochondrial-like [Asterias rubens] diamond 1467 85.1 1 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Forcipulatida Asteriidae Asterias Asterias rubens
31455383 31455383 PRJEB28589_S_NODE_1976_length_414_cov_7.076294_g1868_i0 PRJEB28589 1976 414 7.076294 29.29585716 Holothuria leucospilota 206669 Echinodermata other_Eukaryota 167 3.6499999999999997e-47   NR KAJ8040160.1 206669 g1868 i0 62.8 0.876811594202899 121 45 87.7 0 412 50 318 438 KAJ8040160.1 hypothetical protein HOLleu_14380 [Holothuria leucospilota] diamond 363 167 1 Eukaryota Opisthokonta Metazoa Echinodermata Holothuroidea Aspidochirotida Holothuriidae Holothuria Holothuria leucospilota

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;