RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJEB28062" and tax_phylum = "Phixviricota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Phixviricota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJEB28062 · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
24459 24459 PRJEB28062_P_NODE_28701_length_690_cov_12.724473_g26429_i0 PRJEB28062 28701 690 12.724473 87.7988637 Gokushovirus WZ-2 1758150 Viruses Viruses 150 1.9799999999999994e-42   NR ALS03699.1 1758150 g26429 i0 60.7 1.0304347826087 122 47 53 1 668 303 15 135 ALS03699.1 VP3 [Gokushovirus WZ-2015a] diamond 711 150 1 Viruses   Sangervirae Phixviricota Malgrandaviricetes Petitvirales Microviridae   Gokushovirus WZ-2015a
16600382 16600382 PRJEB28062_P_NODE_105574_length_298_cov_7.253333_g103211_i0 PRJEB28062 105574 298 7.253333 21.61493234 Microviridae sp. 2202644 Viruses Viruses 139 2.07e-28   NTclustered gi|1444873752|gb|MH572284.1| 2202644 g103211 i0 87.5 2.71812080536913 120 15 40 0 179 298 842 961 Microviridae sp. isolate SD_SC_75, complete genome blastn 810 139 1 Viruses   Sangervirae Phixviricota Malgrandaviricetes Petitvirales Microviridae   Microviridae sp.
30791508 30791508 PRJEB28062_P_NODE_7594_length_1432_cov_10.945548_g6195_i0 PRJEB28062 7594 1432 10.945548 156.74024736 Microvirus sp. 2202559 Viruses Viruses 353 2.1199999999999998e-111   NR QJB19711.1 2202559 g6195 i0 89.2 0.389664804469274 186 20 39 0 1420 863 467 652 QJB19711.1 MAG: major capsid protein [Microvirus sp.] diamond 558 353 1 Viruses   Sangervirae Phixviricota Malgrandaviricetes Petitvirales Microviridae   Microvirus sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;