RNAquarium Metadata Server
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contig_metadata

10 rows where bioproject = "PRJEB28062", tax_phylum = "Negarnaviricota" and tax_superkingdom = "Viruses"

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analysis 2

tax_superkingdom 1

  • Viruses · 10 ✖

tax_phylum 1

  • Negarnaviricota · 10 ✖

tax_kingdom 1

bioproject 1

  • PRJEB28062 · 10 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
25557 25557 PRJEB28062_P_NODE_8281_length_1364_cov_6.658404_g6818_i0 PRJEB28062 8281 1364 6.658404 90.82063056 Zebrafish influenza B-like virus RQ01 Viruses Viruses 2401 0   NTclustered gi|383276899|gb|CY113186.1| RQ01 g6818 i0 100 95.3079178885631 1300 0 95 0 1 1300 1962 663 Influenza A virus (A/Victoria/3/1975(H3N2)) polymerase PA (PA) gene, complete cds blastn 130000 2401 1 Viruses   Orthornavirae Negarnaviricota Insthoviricetes Articulavirales Orthomyxoviridae Alphainfluenzavirus Zebrafish influenza B-like virus
988011 988011 PRJEB28062_S_NODE_1_length_666_cov_4.175207_g0_i0 PRJEB28062 1 666 4.175207 27.80687862 Alphainfluenzavirus 197911 Viruses Viruses 966 0   NTclustered gi|75181074|gb|CY002744.1| 332746 g0 i0 99.622 79.1351351351351 529 2 79 0 47 575 1748 1220 Influenza A virus (A/Memphis/109/1972(H3N2)) hemagglutinin (HA) gene, complete cds blastn 52704 974 0.991786447638604 Viruses   Orthornavirae Negarnaviricota Insthoviricetes Articulavirales Orthomyxoviridae Alphainfluenzavirus Alphainfluenzavirus influenzae
3538614 3538614 PRJEB28062_S_NODE_3_length_326_cov_0.988679_g2_i0 PRJEB28062 3 326 0.988679 3.22309354 Alphainfluenzavirus 197911 Viruses Viruses 473 5.519999999999999e-129   NTclustered gi|2905083291|gb|PV081924.1| 11320 g2 i0 99.237 80.3466257668712 262 2 80 0 1 262 528 789 Influenza A virus (A/MDCK serial passage/San Diego/serial passage/2021(H3N2)) segment 4 hemagglutinin (HA) gene, complete cds blastn 26193 473 1 Viruses   Orthornavirae Negarnaviricota Insthoviricetes Articulavirales Orthomyxoviridae Alphainfluenzavirus Alphainfluenzavirus influenzae
4814802 4814802 PRJEB28062_P_NODE_112904_length_278_cov_12.082927_g110541_i0 PRJEB28062 112904 278 12.082927 33.59053706 Alphainfluenzavirus 197911 Viruses Viruses 261 3.91e-65   NTclustered gi|315076809|gb|CY077791.1| 936107 g110541 i0 100 50.4460431654676 141 0 51 0 88 228 142 2 Influenza A virus (A/Bilthoven/1761/1976(H3N2)) polymerase PB2 (PB2) gene, complete cds blastn 14024 261 1 Viruses   Orthornavirae Negarnaviricota Insthoviricetes Articulavirales Orthomyxoviridae Alphainfluenzavirus Alphainfluenzavirus influenzae
4815526 4815526 PRJEB28062_P_NODE_62024_length_443_cov_5.694595_g59664_i0 PRJEB28062 62024 443 5.694595 25.22705585 Alphainfluenzavirus 197911 Viruses Viruses 520 9.769999999999999e-143   NTclustered gi|2905074022|gb|PV081923.1| 11320 g59664 i0 98.635 66.0474040632054 293 4 66 0 101 393 122 414 Influenza A virus (A/MDCK serial passage/San Diego/Serial passage/2021(H3N2)) segment 6 neuraminidase (NA) gene, complete cds blastn 29259 520 1 Viruses   Orthornavirae Negarnaviricota Insthoviricetes Articulavirales Orthomyxoviridae Alphainfluenzavirus Alphainfluenzavirus influenzae
6090328 6090328 PRJEB28062_P_NODE_18025_length_889_cov_3808.025735_g16047_i0 PRJEB28062 18025 889 3808.025735 33853.34878415 Alphainfluenzavirus 197911 Viruses Viruses 1386 0   NTclustered gi|2905083291|gb|PV081924.1| 11320 g16047 i0 99.735 89.7412823397075 756 2 89 0 47 802 1 756 Influenza A virus (A/MDCK serial passage/San Diego/serial passage/2021(H3N2)) segment 4 hemagglutinin (HA) gene, complete cds blastn 79780 1399 0.990707648320229 Viruses   Orthornavirae Negarnaviricota Insthoviricetes Articulavirales Orthomyxoviridae Alphainfluenzavirus Alphainfluenzavirus influenzae
21390038 21390038 PRJEB28062_P_NODE_84117_length_364_cov_0.982818_g81755_i0 PRJEB28062 84117 364 0.982818 3.57745752 Alphainfluenzavirus 197911 Viruses Viruses 673 0   NTclustered gi|13274643|gb|AF258842.1| 153970 g81755 i0 100 100 364 0 100 0 1 364 1203 1566 Influenza A virus (A/Hong Kong/498/97(H3N2)) RNA polymerase (PB2) gene, complete cds blastn 36400 673 1 Viruses   Orthornavirae Negarnaviricota Insthoviricetes Articulavirales Orthomyxoviridae Alphainfluenzavirus Alphainfluenzavirus influenzae
25213014 25213014 PRJEB28062_P_NODE_10540_length_1191_cov_2824.963327_g8904_i0 PRJEB28062 10540 1191 2824.963327 33645.31322457 Alphainfluenzavirus 197911 Viruses Viruses 1851 0   NTclustered gi|392342083|gb|CY121181.1| 385624 g8904 i0 99.412 90.3610411418976 1020 6 90 0 99 1118 1740 721 Influenza A virus (A/Port Chalmers/1/1973(H3N2)) hemagglutinin (HA) gene, complete cds blastn 107620 1868 0.990899357601713 Viruses   Orthornavirae Negarnaviricota Insthoviricetes Articulavirales Orthomyxoviridae Alphainfluenzavirus Alphainfluenzavirus influenzae
27917535 27917535 PRJEB28062_P_NODE_40925_length_567_cov_21.338057_g38591_i0 PRJEB28062 40925 567 21.338057 120.98678319 Rhizoctonia cerealis bunyavirus 3068840 Viruses Viruses 56.6 6.96e-6   NR WMI40170.1 3068840 g38591 i0 26.3 0.804232804232804 152 105 79.9 2 45 497 84 229 WMI40170.1 MAG: hypothetical protein [Rhizoctonia cerealis bunyavirus] diamond 456 56.6 1 Viruses   Orthornavirae Negarnaviricota Ellioviricetes Bunyavirales     Rhizoctonia cerealis bunyavirus
29401635 29401635 PRJEB28062_P_NODE_38369_length_589_cov_2.815891_g36042_i0 PRJEB28062 38369 589 2.815891 16.58559799 Qingdao RNA virus 4 2979708 Viruses Viruses 277 2.72e-82   NR BDR95913.1 2979708 g36042 i0 67.5 0.98811544991511 194 63 98.8 0 584 3 1112 1305 BDR95913.1 RNA-dependent RNA polymerase [Qingdao RNA virus 4] diamond 582 277 1 Viruses   Orthornavirae Negarnaviricota Chunqiuviricetes Muvirales Qinviridae   Qingdao RNA virus 4

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;