RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

3 rows where bioproject = "PRJEB28062" and tax_phylum = "Lenarviricota"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_phylum 1

  • Lenarviricota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJEB28062 · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3851146 3851146 PRJEB28062_P_NODE_5244_length_1748_cov_55.872239_g4152_i0 PRJEB28062 5244 1748 55.872239 976.64673772 Botourmiaviridae sp. 2808997 Viruses Viruses 749 2.87e-264   NR UYL94592.1 2808997 g4152 i0 67.5 0.978260869565217 570 182 97.8 2 1724 15 16 582 UYL94592.1 MAG: RNA-dependent RNA polymerase, partial [Botourmiaviridae sp.] diamond 1710 749 1 Viruses   Orthornavirae Lenarviricota Miaviricetes Ourlivirales Botourmiaviridae   Botourmiaviridae sp.
24250558 24250558 PRJEB28062_P_NODE_40420_length_571_cov_50.594378_g38086_i0 PRJEB28062 40420 571 50.594378 288.89389838 Erysiphe necator associated ourmia-like virus 85 2741865 Viruses Viruses 904 0   NTclustered gi|1848976703|gb|MN611613.1| 2741865 g38086 i0 96.52 1.91243432574431 546 19 96 0 24 569 735 1280 Erysiphe necator associated ourmia-like virus 85 isolate PMS4_45, complete genome blastn 1092 904 1 Viruses   Orthornavirae Lenarviricota Miaviricetes Ourlivirales Botourmiaviridae Ourmiavirus Erysiphe necator associated ourmia-like virus 85
30286390 30286390 PRJEB28062_P_NODE_27752_length_704_cov_1.690967_g25494_i0 PRJEB28062 27752 704 1.690967 11.90440768 Mitoviridae sp. 2809572 Viruses Viruses 169 2.99e-44   NR UJQ92537.1 2809572 g25494 i0 48.6 0.788352272727273 185 94 78.8 1 132 686 4 187 UJQ92537.1 MAG: putative RNA-dependent RNA polymerase [Mitoviridae sp.] diamond 555 169 1 Viruses   Orthornavirae Lenarviricota Howeltoviricetes Cryppavirales Mitoviridae   Mitoviridae sp.

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;