RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJEB28062" and tax_phylum = "Candidatus Poribacteria"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Candidatus Poribacteria · 3 ✖

tax_clade 1

bioproject 1

  • PRJEB28062 · 3 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
24381 24381 PRJEB28062_P_NODE_24921_length_745_cov_6.671131_g22702_i0 PRJEB28062 24921 745 6.671131 49.69992595 Candidatus Poribacteria bacterium 2026781 Bacteria Bacteria 75 1.59e-8   NTclustered gi|2893358430|emb|OZ220722.1| 2026781 g22702 i0 72.093 0.404026845637584 301 67 40 7 31 326 1789905 1790193 MAG: Candidatus Poribacteria bacterium isolate 09e4b887-e8cc-4912-b364-6afc626817b5 genome assembly, chromosome: 1 blastn 301 75 1 Bacteria Bacteria candidate phyla   Candidatus Poribacteria         Candidatus Poribacteria bacterium
22977720 22977720 PRJEB28062_P_NODE_90619_length_343_cov_3.359259_g88257_i0 PRJEB28062 90619 343 3.359259 11.52225837 uncultured Poribacteria bacterium 265321 Bacteria Bacteria 54.7 0.009   NTclustered gi|2518596601|emb|OX639973.1| 265321 g88257 i0 100 0.247813411078717 29 0 8 0 271 299 6604343 6604371 MAG: uncultured Poribacteria bacterium isolate a51c2dcd-0bc8-4832-ac43-f95c9d639ad7 genome assembly, chromosome: 1 blastn 85 54.7 1 Bacteria Bacteria candidate phyla   Candidatus Poribacteria         uncultured Poribacteria bacterium
31328712 31328712 PRJEB28062_P_NODE_106456_length_296_cov_2.170404_g104093_i0 PRJEB28062 106456 296 2.170404 6.42439584 Candidatus Poribacteria bacterium 2026781 Bacteria Bacteria 43.5 0.0337   NR MBB17079.1 2026781 g104093 i0 34.7 0.72972972972973 72 41 70.9 2 57 266 143 210 MBB17079.1 hypothetical protein [Candidatus Poribacteria bacterium] diamond 216 43.5 1 Bacteria Bacteria candidate phyla   Candidatus Poribacteria         Candidatus Poribacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;