RNAquarium Metadata Server
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contig_metadata

5 rows where bioproject = "PRJEB28062" and tax_phylum = "Candidatus Nomuraibacteriota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Candidatus Nomuraibacteriota · 5 ✖

tax_clade 1

bioproject 1

  • PRJEB28062 · 5 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
16600681 16600681 PRJEB28062_P_NODE_121774_length_256_cov_3.153005_g119410_i0 PRJEB28062 121774 256 3.153005 8.0716928 Candidatus Nomurabacteria bacterium 2052152 Bacteria Bacteria 339 1.5999999999999998e-88   NTclustered gi|2258875662|gb|CP060232.1| 2052152 g119410 i0 92.735 82.86328125 234 17 91 0 1 234 962529 962762 MAG: Candidatus Nomurabacteria bacterium isolate HK-STAS-PATE-40 chromosome, complete genome blastn 21213 339 1 Bacteria Bacteria candidate phyla   Candidatus Nomuraibacteriota         Candidatus Nomurabacteria bacterium
26780103 26780103 PRJEB28062_P_NODE_51221_length_497_cov_6.603774_g48871_i0 PRJEB28062 51221 497 6.603774 32.82075678 Candidatus Nomurabacteria bacterium 2052152 Bacteria Bacteria 166 8.94e-50   NR MCB9822400.1 2052152 g48871 i0 86.1 1.21931589537223 101 14 61 0 486 184 23 123 MCB9822400.1 hypothetical protein [Candidatus Nomurabacteria bacterium] diamond 606 166 1 Bacteria Bacteria candidate phyla   Candidatus Nomuraibacteriota         Candidatus Nomurabacteria bacterium
31392172 31392172 PRJEB28062_P_NODE_118056_length_265_cov_3.145833_g115693_i0 PRJEB28062 118056 265 3.145833 8.33645745 Candidatus Nomurabacteria bacterium 2052152 Bacteria Bacteria 140 4.08e-40   NR MDB5259797.1 2052152 g115693 i0 86.4 1.82264150943396 81 11 91.7 0 264 22 80 160 MDB5259797.1 translation initiation factor translation initiation factor [Candidatus Nomurabacteria bacterium] diamond 483 140 1 Bacteria Bacteria candidate phyla   Candidatus Nomuraibacteriota         Candidatus Nomurabacteria bacterium
31898123 31898123 PRJEB28062_P_NODE_83997_length_364_cov_3.683849_g81635_i0 PRJEB28062 83997 364 3.683849 13.40921036 Candidatus Nomurabacteria bacterium 2052152 Bacteria Bacteria 70.5 2.66e-11   NR USN96967.1 2052152 g81635 i0 49.3 1.76373626373626 69 35 56.9 0 54 260 466 534 USN96967.1 MAG: glycosyltransferase family 2 protein [Candidatus Nomurabacteria bacterium] diamond 642 70.5 1 Bacteria Bacteria candidate phyla   Candidatus Nomuraibacteriota         Candidatus Nomurabacteria bacterium
31961361 31961361 PRJEB28062_P_NODE_89158_length_347_cov_12.762774_g86796_i0 PRJEB28062 89158 347 12.762774 44.28682578 Candidatus Nomurabacteria bacterium 2052152 Bacteria Bacteria 90.5 5.24e-20   NR HCC06221.1 2052152 g86796 i0 71.7 1.03746397694524 60 17 51.9 0 333 154 37 96 HCC06221.1 hypothetical protein [Candidatus Nomurabacteria bacterium] diamond 360 90.5 1 Bacteria Bacteria candidate phyla   Candidatus Nomuraibacteriota         Candidatus Nomurabacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;