RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJEB28062" and tax_phylum = "Candidatus Microgenomatota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Microgenomatota · 1 ✖

tax_clade 1

bioproject 1

  • PRJEB28062 · 1 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
31012668 31012668 PRJEB28062_P_NODE_57415_length_464_cov_5.214834_g55060_i0 PRJEB28062 57415 464 5.214834 24.19682976 Microgenomates bacterium 39_6 1641391 Bacteria Bacteria 114 1.52e-26   NR KUK83134.1 1641391 g55060 i0 71.8 0.989224137931034 78 22 50.4 0 393 160 156 233 KUK83134.1 MAG: Uncharacterized protein XD98_0422 [Microgenomates bacterium 39_6] diamond 459 114 1 Bacteria Bacteria candidate phyla   Candidatus Microgenomatota         Microgenomates bacterium 39_6

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;