RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJEB28062" and tax_phylum = "Candidatus Kryptoniota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Kryptoniota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB28062 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29489727 29489727 PRJEB28062_P_NODE_17230_length_912_cov_43.249106_g15282_i0 PRJEB28062 17230 912 43.249106 394.43184672 Bacteria 2 Bacteria Bacteria 239 8.140000000000001e-75   NR WP_092347279.1 1633643 g15282 i0 61.1 2.5 190 74 62.5 0 604 35 57 246 WP_092347279.1 type II restriction endonuclease [Candidatus Chrysopegis kryptomonas] diamond 2280 239 1 Bacteria FCB group Pseudomonadati Candidatus Kryptoniota       Candidatus Chryseopegocella Candidatus Chryseopegocella kryptomonas
30595313 30595313 PRJEB28062_P_NODE_50333_length_502_cov_33.862471_g47984_i0 PRJEB28062 50333 502 33.862471 169.98960442 Candidatus Kryptonium 1855365 Bacteria Bacteria 186 4.569999999999999e-54   NR WP_082349195.1 1633631 g47984 i0 61 5.16334661354582 146 57 87.3 0 58 495 26 171 WP_082349195.1 DNA methyltransferase [Candidatus Kryptonium thompsonii] diamond 2592 186 1 Bacteria FCB group Pseudomonadati Candidatus Kryptoniota       Candidatus Kryptonium Candidatus Kryptonium thompsonii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;