RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJEB28062" and tax_phylum = "Candidatus Adleribacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Adleribacteriota · 1 ✖

tax_clade 1

bioproject 1

  • PRJEB28062 · 1 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27152715 27152715 PRJEB28062_P_NODE_110642_length_285_cov_1.089623_g108279_i0 PRJEB28062 110642 285 1.089623 3.10542555 Bacteria 2 Bacteria Bacteria 91.7 3.38e-19   NR OGC86926.1 1797245 g108279 i0 48.4 3.8 93 47 96.8 1 284 9 212 304 OGC86926.1 MAG: hypothetical protein A2949_01445 [Candidatus Adlerbacteria bacterium RIFCSPLOWO2_01_FULL_54_21b] diamond 1083 92 0.996739130434783 Bacteria Bacteria candidate phyla   Candidatus Adleribacteriota         Candidatus Adlerbacteria bacterium RIFCSPLOWO2_01_FULL_54_21b

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;