contig_metadata
12 rows where bioproject = "PRJEB28062", tax_kingdom = "Thermotogati" and tax_phylum = "Synergistota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 5127564 | 5127564 | PRJEB28062_P_NODE_61965_length_443_cov_13.135135_g59605_i0 | PRJEB28062 | 61965 | 443 | 13.135135 | 58.18864805 | Thermanaerovibrio acidaminovorans | 81462 | Bacteria | Bacteria | 701 | 0 | NTclustered | gi|269099254|gb|CP001818.1| | 525903 | g59605 | i0 | 98.492 | 0.898419864559819 | 398 | 5 | 90 | 1 | 26 | 422 | 1549186 | 1548789 | Thermanaerovibrio acidaminovorans DSM 6589, complete genome | blastn | 398 | 701 | 1 | Bacteria | Thermotogati | Synergistota | Synergistia | Synergistales | Synergistaceae | Thermanaerovibrio | Thermanaerovibrio acidaminovorans | ||
| 10228438 | 10228438 | PRJEB28062_P_NODE_87709_length_352_cov_7.193548_g85347_i0 | PRJEB28062 | 87709 | 352 | 7.193548 | 25.32128896 | Thermanaerovibrio acidaminovorans | 81462 | Bacteria | Bacteria | 588 | 2.05e-163 | NTclustered | gi|269099254|gb|CP001818.1| | 525903 | g85347 | i0 | 98.792 | 10.3892045454545 | 331 | 3 | 94 | 1 | 14 | 343 | 233124 | 233454 | Thermanaerovibrio acidaminovorans DSM 6589, complete genome | blastn | 3657 | 588 | 1 | Bacteria | Thermotogati | Synergistota | Synergistia | Synergistales | Synergistaceae | Thermanaerovibrio | Thermanaerovibrio acidaminovorans | ||
| 12777797 | 12777797 | PRJEB28062_P_NODE_18051_length_889_cov_3.942402_g16072_i0 | PRJEB28062 | 18051 | 889 | 3.942402 | 35.04795378 | Fretibacterium fastidiosum | 651822 | Bacteria | Bacteria | 854 | 0 | NTclustered | gi|2869663113|emb|OZ209244.1| | 651822 | g16072 | i0 | 97.228 | 1.11361079865017 | 505 | 13 | 57 | 1 | 368 | 871 | 2002930 | 2003434 | Fretibacterium fastidiosum strain SGP1 genome assembly, chromosome: Ff3 | blastn | 990 | 854 | 1 | Bacteria | Thermotogati | Synergistota | Synergistia | Synergistales | Aminobacteriaceae | Fretibacterium | Fretibacterium fastidiosum | ||
| 26906640 | 26906640 | PRJEB28062_P_NODE_133762_length_230_cov_2.579618_g131398_i0 | PRJEB28062 | 133762 | 230 | 2.579618 | 5.9331214 | Synergistales bacterium | 2268201 | Bacteria | Bacteria | 45.8 | 0.00133 | NR | HOO89166.1 | 2268201 | g131398 | i0 | 72.7 | 1.16086956521739 | 22 | 6 | 28.7 | 0 | 5 | 70 | 116 | 137 | HOO89166.1 GDP-mannose 4,6-dehydratase [Synergistales bacterium] | diamond | 267 | 45.8 | 1 | Bacteria | Thermotogati | Synergistota | Synergistia | Synergistales | Synergistales bacterium | ||||
| 29054451 | 29054451 | PRJEB28062_P_NODE_112648_length_279_cov_3.140777_g110285_i0 | PRJEB28062 | 112648 | 279 | 3.140777 | 8.76276783 | Synergistaceae bacterium | 2053624 | Bacteria | Bacteria | 72.4 | 1.22e-12 | NR | MBQ6737035.1 | 2053624 | g110285 | i0 | 40 | 1.50537634408602 | 70 | 42 | 75.3 | 0 | 260 | 51 | 4 | 73 | MBQ6737035.1 DUF2800 domain-containing protein [Synergistaceae bacterium] | diamond | 420 | 72.4 | 1 | Bacteria | Thermotogati | Synergistota | Synergistia | Synergistales | Synergistaceae | Synergistaceae bacterium | |||
| 29780498 | 29780498 | PRJEB28062_P_NODE_54631_length_478_cov_8.479012_g52278_i0 | PRJEB28062 | 54631 | 478 | 8.479012 | 40.52967736 | uncultured Fretibacterium sp. | 1678694 | Bacteria | Bacteria | 192 | 5.7499999999999985e-56 | NR | WP_299300527.1 | 1678694 | g52278 | i0 | 90 | 0.690376569037657 | 110 | 11 | 69 | 0 | 36 | 365 | 347 | 456 | WP_299300527.1 UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [uncultured Fretibacterium sp.] | diamond | 330 | 192 | 1 | Bacteria | Thermotogati | Synergistota | Synergistia | Synergistales | Aminobacteriaceae | Fretibacterium | uncultured Fretibacterium sp. | ||
| 29843676 | 29843676 | PRJEB28062_P_NODE_45591_length_532_cov_21.137255_g43251_i0 | PRJEB28062 | 45591 | 532 | 21.137255 | 112.4501966 | Fretibacterium sp. | 2699746 | Bacteria | Bacteria | 167 | 8.599999999999999e-48 | NR | NLL37143.1 | 2699746 | g43251 | i0 | 80.4 | 1.7593984962406 | 102 | 20 | 57.5 | 0 | 327 | 22 | 3 | 104 | NLL37143.1 ABC transporter permease [Fretibacterium sp.] | diamond | 936 | 167 | 1 | Bacteria | Thermotogati | Synergistota | Synergistia | Synergistales | Aminobacteriaceae | Fretibacterium | Fretibacterium sp. | ||
| 30633345 | 30633345 | PRJEB28062_P_NODE_59993_length_452_cov_8.065963_g57633_i0 | PRJEB28062 | 59993 | 452 | 8.065963 | 36.45815276 | Synergistaceae bacterium | 2053624 | Bacteria | Bacteria | 63.2 | 2.26e-8 | NR | MEA4872224.1 | 2053624 | g57633 | i0 | 33.6 | 0.969026548672566 | 146 | 88 | 92.9 | 7 | 19 | 438 | 42 | 184 | MEA4872224.1 zinc ribbon domain-containing protein [Synergistaceae bacterium] | diamond | 438 | 63.2 | 1 | Bacteria | Thermotogati | Synergistota | Synergistia | Synergistales | Synergistaceae | Synergistaceae bacterium | |||
| 30759973 | 30759973 | PRJEB28062_P_NODE_18454_length_878_cov_8.404969_g16467_i0 | PRJEB28062 | 18454 | 878 | 8.404969 | 73.795627820000007 | uncultured Fretibacterium sp. | 1678694 | Bacteria | Bacteria | 420 | 1.5099999999999999e-142 | NR | WP_299301840.1 | 1678694 | g16467 | i0 | 92.9 | 0.765375854214123 | 224 | 16 | 76.5 | 0 | 4 | 675 | 272 | 495 | WP_299301840.1 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [uncultured Fretibacterium sp.] | diamond | 672 | 420 | 1 | Bacteria | Thermotogati | Synergistota | Synergistia | Synergistales | Aminobacteriaceae | Fretibacterium | uncultured Fretibacterium sp. | ||
| 31075980 | 31075980 | PRJEB28062_P_NODE_33435_length_635_cov_9.846975_g31124_i0 | PRJEB28062 | 33435 | 635 | 9.846975 | 62.52829125 | uncultured Fretibacterium sp. | 1678694 | Bacteria | Bacteria | 347 | 1.0799999999999999e-116 | NR | WP_299076655.1 | 1678694 | g31124 | i0 | 94 | 0.949606299212598 | 201 | 12 | 95 | 0 | 22 | 624 | 125 | 325 | WP_299076655.1 ABC transporter permease [uncultured Fretibacterium sp.] | diamond | 603 | 347 | 1 | Bacteria | Thermotogati | Synergistota | Synergistia | Synergistales | Aminobacteriaceae | Fretibacterium | uncultured Fretibacterium sp. | ||
| 31392225 | 31392225 | PRJEB28062_P_NODE_87476_length_353_cov_2.689286_g85114_i0 | PRJEB28062 | 87476 | 353 | 2.689286 | 9.49317958 | uncultured Fretibacterium sp. | 1678694 | Bacteria | Bacteria | 159 | 2.7e-44 | NR | WP_347712700.1 | 1678694 | g85114 | i0 | 88.4 | 0.807365439093484 | 95 | 11 | 80.7 | 0 | 2 | 286 | 2 | 96 | WP_347712700.1 hypothetical protein [uncultured Fretibacterium sp.] | diamond | 285 | 159 | 1 | Bacteria | Thermotogati | Synergistota | Synergistia | Synergistales | Aminobacteriaceae | Fretibacterium | uncultured Fretibacterium sp. | ||
| 32467878 | 32467878 | PRJEB28062_P_NODE_111319_length_283_cov_1.366667_g108956_i0 | PRJEB28062 | 111319 | 283 | 1.366667 | 3.86766761 | Synergistota bacterium | 2268202 | Bacteria | Bacteria | 90.5 | 3.93e-20 | NR | MCS7233147.1 | 2268202 | g108956 | i0 | 63.4 | 2.93639575971731 | 93 | 34 | 98.6 | 0 | 279 | 1 | 16 | 108 | MCS7233147.1 4Fe-4S binding protein [Synergistota bacterium] | diamond | 831 | 90.5 | 1 | Bacteria | Thermotogati | Synergistota | Synergistota bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;