RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJEB28062", tax_kingdom = "Shotokuvirae" and tax_phylum = "Cressdnaviricota"

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tax_superkingdom 1

tax_phylum 1

  • Cressdnaviricota · 3 ✖

tax_kingdom 1

  • Shotokuvirae · 3 ✖

bioproject 1

  • PRJEB28062 · 3 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
16290204 16290204 PRJEB28062_P_NODE_47733_length_519_cov_2.652466_g45387_i0 PRJEB28062 47733 519 2.652466 13.76629854 Gemykrogvirus 1985367 Viruses Viruses 898 0   NTclustered gi|746815432|ref|NC_026144.1| 1519399 g45387 i0 99.197 7.02312138728324 498 4 96 0 1 498 551 54 Sewage-associated gemycircularvirus-4 isolate BS3913, complete sequence blastn 3645 898 1 Viruses   Shotokuvirae Cressdnaviricota Repensiviricetes Geplafuvirales Genomoviridae Gemykrogvirus Gemykrogvirus sewopo1
19151335 19151335 PRJEB28062_P_NODE_94176_length_332_cov_3.803089_g91814_i0 PRJEB28062 94176 332 3.803089 12.62625548 Emberiza chrysophrys CRESS-DNA-virus sp. 2815029 Viruses Viruses 178 4.95e-40   NTclustered gi|2015371919|gb|MW182746.1| 2815029 g91814 i0 85 40.7801204819277 180 21 53 5 46 222 1407 1583 MAG: Emberiza chrysophrys CRESS-DNA-virus sp. isolate ybb150cir4 genomic sequence, sequence blastn 13539 178 1 Viruses   Shotokuvirae Cressdnaviricota         Emberiza chrysophrys CRESS-DNA-virus sp.
24250331 24250331 PRJEB28062_P_NODE_30220_length_670_cov_42.946399_g27933_i0 PRJEB28062 30220 670 42.946399 287.7408733 Red panda feces-associated circular DNA virus 17 2863970 Viruses Viruses 141 1.38e-28   NTclustered gi|2099633191|gb|MZ556186.1| 2863970 g27933 i0 84.828 0.21641791044776101 145 16 21 5 56 197 4460 4601 Red panda feces-associated circular DNA virus 17 isolate Rpf280cress07-12 genomic sequence blastn 145 141 1 Viruses   Shotokuvirae Cressdnaviricota         Red panda feces-associated circular DNA virus 17

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;