contig_metadata
57 rows where bioproject = "PRJEB28062", tax_kingdom = "Pseudomonadati" and tax_phylum = "Spirochaetota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 2573658 | 2573658 | PRJEB28062_P_NODE_115383_length_272_cov_1.688442_g113020_i0 | PRJEB28062 | 115383 | 272 | 1.688442 | 4.59256224 | Treponema sp. OMZ 803 | 120682 | Bacteria | Bacteria | 488 | 1.6099999999999996e-133 | NTclustered | gi|2265127813|gb|CP051195.1| | 120682 | g113020 | i0 | 99.259 | 15.0919117647059 | 270 | 2 | 99 | 0 | 1 | 270 | 1107462 | 1107193 | Treponema sp. OMZ 803 strain BF2M chromosome, complete genome | blastn | 4105 | 488 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema sp. OMZ 803 | ||
| 8952156 | 8952156 | PRJEB28062_P_NODE_60428_length_450_cov_7.286472_g58068_i0 | PRJEB28062 | 60428 | 450 | 7.286472 | 32.789124 | Treponema medium | 58231 | Bacteria | Bacteria | 174 | 8.92e-39 | NTclustered | gi|1996296230|gb|CP031393.1| | 58231 | g58068 | i0 | 83.163 | 2.60888888888889 | 196 | 28 | 43 | 4 | 34 | 227 | 877449 | 877257 | Treponema medium strain ATCC 700293 chromosome, complete genome | blastn | 1174 | 174 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema medium | ||
| 10226460 | 10226460 | PRJEB28062_P_NODE_113849_length_276_cov_2.083744_g111486_i0 | PRJEB28062 | 113849 | 276 | 2.083744 | 5.75113344 | Treponema | 157 | Bacteria | Bacteria | 140 | 1.85e-36 | NR | WP_385981414.1 | 166 | g111486 | i0 | 79.8 | 1.82608695652174 | 84 | 17 | 91.3 | 0 | 256 | 5 | 624 | 707 | WP_385981414.1 acyl-CoA dehydratase activase-related protein, partial [Treponema sp.] | diamond | 504 | 140 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema sp. | ||
| 10227837 | 10227837 | PRJEB28062_P_NODE_56929_length_466_cov_15.613232_g54575_i0 | PRJEB28062 | 56929 | 466 | 15.613232 | 72.75766112 | Treponema vincentii | 69710 | Bacteria | Bacteria | 444 | 6.39e-120 | NTclustered | gi|2265113193|gb|CP051148.1| | 69710 | g54575 | i0 | 85.446 | 6.33047210300429 | 426 | 62 | 91 | 0 | 23 | 448 | 897367 | 896942 | Treponema vincentii strain OMZ 861 chromosome, complete genome | blastn | 2950 | 444 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema vincentii | ||
| 11502072 | 11502072 | PRJEB28062_P_NODE_133130_length_232_cov_5.371069_g130766_i0 | PRJEB28062 | 133130 | 232 | 5.371069 | 12.46088008 | Treponema denticola | 158 | Bacteria | Bacteria | 233 | 6.899999999999999e-57 | NTclustered | gi|2277007739|gb|CP038800.1| | 158 | g130766 | i0 | 86.854 | 147.560344827586 | 213 | 23 | 91 | 5 | 1 | 211 | 1101327 | 1101118 | Treponema denticola strain ATCC 700768 chromosome, complete genome | blastn | 34234 | 233 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema denticola | ||
| 12777779 | 12777779 | PRJEB28062_P_NODE_17371_length_908_cov_13.196407_g15419_i0 | PRJEB28062 | 17371 | 908 | 13.196407 | 119.82337556 | Treponema vincentii | 69710 | Bacteria | Bacteria | 1580 | 0 | NTclustered | gi|1807378492|gb|CP048020.1| | 69710 | g15419 | i0 | 99.427 | 13.374449339207 | 872 | 2 | 96 | 3 | 19 | 889 | 592217 | 593086 | Treponema vincentii strain OMZ 804 chromosome, complete genome | blastn | 12144 | 1580 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema vincentii | ||
| 15326928 | 15326928 | PRJEB28062_P_NODE_41613_length_562_cov_5.335378_g39278_i0 | PRJEB28062 | 41613 | 562 | 5.335378 | 29.98482436 | Spirochaetaceae bacterium | 1898206 | Bacteria | Bacteria | 54.7 | 4.76e-5 | NR | TVQ98860.1 | 1898206 | g39278 | i0 | 59.2 | 0.51779359430605 | 49 | 16 | 24 | 1 | 146 | 12 | 62 | 110 | TVQ98860.1 MAG: DUF362 domain-containing protein [Spirochaetaceae bacterium] | diamond | 291 | 54.7 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Spirochaetaceae | Spirochaetaceae bacterium | |||
| 16289797 | 16289797 | PRJEB28062_P_NODE_136913_length_209_cov_4.948529_g134549_i0 | PRJEB28062 | 136913 | 209 | 4.948529 | 10.34242561 | Treponema | 157 | Bacteria | Bacteria | 200 | 6.18e-47 | NTclustered | gi|332179772|gb|CP002696.1| | 906968 | g134549 | i0 | 86.316 | 55.511961722488 | 190 | 19 | 89 | 7 | 1 | 186 | 430015 | 429829 | Treponema brennaborense DSM 12168, complete genome | blastn | 11602 | 200 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema brennaborense | ||
| 17875862 | 17875862 | PRJEB28062_P_NODE_18875_length_867_cov_5.593199_g16869_i0 | PRJEB28062 | 18875 | 867 | 5.593199 | 48.49303533 | Spirochaetales | 136 | Bacteria | Bacteria | 391 | 1.45e-133 | NR | MEL3906746.1 | 166 | g16869 | i0 | 70.3 | 10.7612456747405 | 283 | 84 | 97.9 | 0 | 9 | 857 | 39 | 321 | MEL3906746.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD [Treponema sp.] | diamond | 9330 | 394 | 0.99238578680203 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema sp. | ||
| 20425307 | 20425307 | PRJEB28062_P_NODE_35557_length_614_cov_114.334566_g33236_i0 | PRJEB28062 | 35557 | 614 | 114.334566 | 702.01423524 | Treponema vincentii | 69710 | Bacteria | Bacteria | 787 | 0 | NTclustered | gi|2265115921|gb|CP051153.1| | 69710 | g33236 | i0 | 92.559 | 4.48208469055375 | 551 | 38 | 90 | 2 | 23 | 573 | 161601 | 161054 | Treponema vincentii strain OMZ 862 chromosome, complete genome | blastn | 2752 | 787 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema vincentii | ||
| 21702498 | 21702498 | PRJEB28062_P_NODE_91858_length_339_cov_4.473684_g89496_i0 | PRJEB28062 | 91858 | 339 | 4.473684 | 15.16578876 | Treponema sp. OMZ 305 | 1659192 | Bacteria | Bacteria | 512 | 1.22e-140 | NTclustered | gi|2265133351|gb|CP051300.1| | 1659192 | g89496 | i0 | 97.039 | 4.43362831858407 | 304 | 9 | 90 | 0 | 13 | 316 | 304330 | 304027 | Treponema sp. OMZ 305 chromosome, complete genome | blastn | 1503 | 512 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema sp. OMZ 305 | ||
| 22977071 | 22977071 | PRJEB28062_P_NODE_55779_length_472_cov_6.817043_g53425_i0 | PRJEB28062 | 55779 | 472 | 6.817043 | 32.17644296 | Spirochaetia bacterium | 2053615 | Bacteria | Bacteria | 285 | 4.16e-72 | NTclustered | gi|2891482181|emb|OZ219914.1| | 2053615 | g53425 | i0 | 78.96 | 2.25635593220339 | 423 | 85 | 89 | 4 | 24 | 444 | 396400 | 395980 | MAG: Spirochaetia bacterium isolate 65460407-d738-4661-97af-02a88c6845d9 genome assembly, chromosome: 2 | blastn | 1065 | 285 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetia bacterium | |||||
| 26621610 | 26621610 | PRJEB28062_P_NODE_117221_length_267_cov_3.701031_g114858_i0 | PRJEB28062 | 117221 | 267 | 3.701031 | 9.88175277 | Treponema vincentii | 69710 | Bacteria | Bacteria | 99.8 | 4.21e-22 | NR | WP_016517831.1 | 69710 | g114858 | i0 | 53.1 | 1.82022471910112 | 81 | 38 | 91 | 0 | 1 | 243 | 37 | 117 | WP_016517831.1 transglutaminase domain-containing protein [Treponema vincentii] | diamond | 486 | 99.8 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema vincentii | ||
| 26653053 | 26653053 | PRJEB28062_P_NODE_112661_length_279_cov_2.859223_g110298_i0 | PRJEB28062 | 112661 | 279 | 2.859223 | 7.97723217 | Spirochaetota bacterium | 2202144 | Bacteria | Bacteria | 168 | 2.9699999999999993e-46 | NR | HPF05901.1 | 2202144 | g110298 | i0 | 98.8 | 0.924731182795699 | 86 | 1 | 92.5 | 0 | 259 | 2 | 446 | 531 | HPF05901.1 1-acyl-sn-glycerol-3-phosphate acyltransferase [Spirochaetota bacterium] | diamond | 258 | 168 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetota bacterium | ||||||
| 26906658 | 26906658 | PRJEB28062_P_NODE_54862_length_477_cov_3.475248_g52509_i0 | PRJEB28062 | 54862 | 477 | 3.475248 | 16.57693296 | Treponema sp. | 166 | Bacteria | Bacteria | 252 | 1.08e-77 | NR | MEE0886360.1 | 166 | g52509 | i0 | 80.1 | 1.9622641509434 | 156 | 31 | 98.1 | 0 | 10 | 477 | 388 | 543 | MEE0886360.1 flagellar hook-associated protein FlgK [Treponema sp.] | diamond | 936 | 252 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema sp. | ||
| 27127648 | 27127648 | PRJEB28062_P_NODE_84582_length_362_cov_5.027682_g82220_i0 | PRJEB28062 | 84582 | 362 | 5.027682 | 18.20020884 | Treponema socranskii | 53419 | Bacteria | Bacteria | 179 | 1.09e-53 | NR | WP_180486363.1 | 53419 | g82220 | i0 | 75.9 | 0.92817679558011 | 112 | 27 | 92.8 | 0 | 360 | 25 | 40 | 151 | WP_180486363.1 lipase family alpha/beta hydrolase [Treponema socranskii] | diamond | 336 | 179 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema socranskii | ||
| 27381055 | 27381055 | PRJEB28062_P_NODE_22423_length_789_cov_28.731844_g20261_i0 | PRJEB28062 | 22423 | 789 | 28.731844 | 226.69424916 | Spirochaetota bacterium | 2202144 | Bacteria | Bacteria | 325 | 2.48e-108 | NR | HRX47452.1 | 2202144 | g20261 | i0 | 85.4 | 0.752851711026616 | 198 | 29 | 75.3 | 0 | 595 | 2 | 1 | 198 | HRX47452.1 metalloregulator ArsR/SmtB family transcription factor [Spirochaetota bacterium] | diamond | 594 | 325 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetota bacterium | ||||||
| 27469304 | 27469304 | PRJEB28062_P_NODE_95543_length_328_cov_3.721569_g93181_i0 | PRJEB28062 | 95543 | 328 | 3.721569 | 12.20674632 | Bacteria | 2 | Bacteria | Bacteria | 147 | 4.81e-40 | NR | PKL39026.1 | 2013832 | g93181 | i0 | 72.8 | 1.88414634146341 | 103 | 28 | 94.2 | 0 | 310 | 2 | 221 | 323 | PKL39026.1 MAG: MFS transporter [Spirochaetae bacterium HGW-Spirochaetae-1] | diamond | 618 | 147 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetae bacterium HGW-Spirochaetae-1 | ||||||
| 27475636 | 27475636 | PRJEB28062_P_NODE_80563_length_375_cov_4.705298_g78201_i0 | PRJEB28062 | 80563 | 375 | 4.705298 | 17.6448675 | Treponema | 157 | Bacteria | Bacteria | 183 | 1.7799999999999995e-55 | NR | WP_212566030.1 | 157 | g78201 | i0 | 81.7 | 1.784 | 109 | 20 | 87.2 | 0 | 328 | 2 | 27 | 135 | WP_212566030.1 MULTISPECIES: tetratricopeptide repeat protein [Treponema] | diamond | 669 | 183 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | |||
| 27563598 | 27563598 | PRJEB28062_P_NODE_73784_length_398_cov_3.670769_g71422_i0 | PRJEB28062 | 73784 | 398 | 3.670769 | 14.60966062 | root | 1 | Root_unresolved | Root_unresolved | 145 | 6.44e-39 | NR | WP_230974626.1 | 69710 | g71422 | i0 | 62.7 | 4.74874371859296 | 126 | 40 | 89.7 | 2 | 366 | 10 | 179 | 304 | WP_230974626.1 glycosyltransferase [Treponema vincentii] | diamond | 1890 | 146 | 0.993150684931507 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema vincentii | ||
| 27728567 | 27728567 | PRJEB28062_P_NODE_27764_length_703_cov_61.096825_g25506_i0 | PRJEB28062 | 27764 | 703 | 61.096825 | 429.51067975 | Spirochaetia bacterium | 2053615 | Bacteria | Bacteria | 281 | 2.58e-83 | NR | GHU70841.1 | 2053615 | g25506 | i0 | 68.1 | 0.92176386913229 | 216 | 69 | 92.2 | 0 | 21 | 668 | 940 | 1155 | GHU70841.1 hypothetical protein FACS189450_05930 [Spirochaetia bacterium] | diamond | 648 | 281 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetia bacterium | |||||
| 27917527 | 27917527 | PRJEB28062_P_NODE_129805_length_242_cov_2.455621_g127441_i0 | PRJEB28062 | 129805 | 242 | 2.455621 | 5.94260282 | Treponema pedis | 409322 | Bacteria | Bacteria | 65.9 | 1e-10 | NR | WP_024468134.1 | 409322 | g127441 | i0 | 49.2 | 0.78099173553719 | 63 | 32 | 78.1 | 0 | 242 | 54 | 26 | 88 | WP_024468134.1 hypothetical protein [Treponema pedis] | diamond | 189 | 65.9 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema pedis | ||
| 27980865 | 27980865 | PRJEB28062_P_NODE_81925_length_371_cov_1.382550_g79563_i0 | PRJEB28062 | 81925 | 371 | 1.38255 | 5.1292605 | Spirochaetota bacterium | 2202144 | Bacteria | Bacteria | 193 | 1.08e-60 | NR | HOP31019.1 | 2202144 | g79563 | i0 | 85.3 | 0.881401617250674 | 109 | 16 | 88.1 | 0 | 329 | 3 | 3 | 111 | HOP31019.1 HyaD/HybD family hydrogenase maturation endopeptidase [Spirochaetota bacterium] | diamond | 327 | 193 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetota bacterium | ||||||
| 28069015 | 28069015 | PRJEB28062_P_NODE_41685_length_561_cov_40.577869_g39350_i0 | PRJEB28062 | 41685 | 561 | 40.577869 | 227.64184509 | Bacteria | 2 | Bacteria | Bacteria | 249 | 6.920000000000001e-79 | NR | PKL07630.1 | 2013839 | g39350 | i0 | 74.2 | 3.28342245989305 | 155 | 40 | 82.9 | 0 | 530 | 66 | 11 | 165 | PKL07630.1 MAG: galactitol-1-phosphate 5-dehydrogenase [Spirochaetae bacterium HGW-Spirochaetae-7] | diamond | 1842 | 249 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetae bacterium HGW-Spirochaetae-7 | ||||||
| 28170240 | 28170240 | PRJEB28062_P_NODE_123346_length_253_cov_1.466667_g120982_i0 | PRJEB28062 | 123346 | 253 | 1.466667 | 3.71066751 | Spirochaetota bacterium | 2202144 | Bacteria | Bacteria | 76.3 | 6.38e-14 | NR | HOP28035.1 | 2202144 | g120982 | i0 | 50 | 0.901185770750988 | 76 | 38 | 90.1 | 0 | 253 | 26 | 376 | 451 | HOP28035.1 hypothetical protein [Spirochaetota bacterium] | diamond | 228 | 76.3 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetota bacterium | ||||||
| 28264784 | 28264784 | PRJEB28062_P_NODE_103146_length_305_cov_8.508621_g100783_i0 | PRJEB28062 | 103146 | 305 | 8.508621 | 25.95129405 | Sphaerochaeta sp. | 1972642 | Bacteria | Bacteria | 70.9 | 9.93e-12 | NR | MCK9599440.1 | 1972642 | g100783 | i0 | 57.4 | 1.05245901639344 | 54 | 23 | 53.1 | 0 | 129 | 290 | 87 | 140 | MCK9599440.1 hypothetical protein [Sphaerochaeta sp.] | diamond | 321 | 70.9 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Sphaerochaetaceae | Sphaerochaeta | Sphaerochaeta sp. | ||
| 28264836 | 28264836 | PRJEB28062_P_NODE_98506_length_319_cov_3.873984_g96144_i0 | PRJEB28062 | 98506 | 319 | 3.873984 | 12.35800896 | Spirochaetota bacterium | 2202144 | Bacteria | Bacteria | 184 | 3.38e-54 | NR | HOP28831.1 | 2202144 | g96144 | i0 | 92.8 | 0.912225705329154 | 97 | 7 | 91.2 | 0 | 311 | 21 | 187 | 283 | HOP28831.1 phosphoribosylamine--glycine ligase [Spirochaetota bacterium] | diamond | 291 | 184 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetota bacterium | ||||||
| 28391268 | 28391268 | PRJEB28062_P_NODE_90586_length_343_cov_4.033333_g88224_i0 | PRJEB28062 | 90586 | 343 | 4.033333 | 13.83433219 | Candidatus Thalassospirochaeta sargassi | 3119039 | Bacteria | Bacteria | 63.9 | 3.89e-9 | NR | MDC7226541.1 | 3119039 | g88224 | i0 | 28.4 | 0.9533527696793 | 109 | 77 | 95.3 | 1 | 13 | 339 | 86 | 193 | MDC7226541.1 glycosyltransferase family 4 protein [Candidiatus Thalassospirochaeta sargassi] | diamond | 327 | 63.9 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Spirochaetaceae | Candidatus Thalassospirochaeta | Candidatus Thalassospirochaeta sargassi | ||
| 28542899 | 28542899 | PRJEB28062_P_NODE_49267_length_509_cov_5.284404_g46919_i0 | PRJEB28062 | 49267 | 509 | 5.284404 | 26.89761636 | Treponema | 157 | Bacteria | Bacteria | 239 | 1.06e-69 | NR | MCR5401627.1 | 166 | g46919 | i0 | 72.7 | 3.72495088408644 | 154 | 41 | 90.8 | 1 | 2 | 463 | 519 | 671 | MCR5401627.1 type I pullulanase [Treponema sp.] | diamond | 1896 | 239 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema sp. | ||
| 28801549 | 28801549 | PRJEB28062_P_NODE_71348_length_406_cov_19.672673_g68987_i0 | PRJEB28062 | 71348 | 406 | 19.672673 | 79.87105238 | Spirochaetota bacterium | 2202144 | Bacteria | Bacteria | 198 | 6.469999999999999e-61 | NR | HPR38453.1 | 2202144 | g68987 | i0 | 81.1 | 1.80295566502463 | 122 | 23 | 90.1 | 0 | 19 | 384 | 82 | 203 | HPR38453.1 hypothetical protein [Spirochaetota bacterium] | diamond | 732 | 198 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetota bacterium | ||||||
| 28833279 | 28833279 | PRJEB28062_P_NODE_58648_length_458_cov_6.929870_g56289_i0 | PRJEB28062 | 58648 | 458 | 6.92987 | 31.7388046 | Oceanispirochaeta crateris | 2518645 | Bacteria | Bacteria | 91.3 | 2.68e-19 | NR | WP_149487666.1 | 2518645 | g56289 | i0 | 65.6 | 0.399563318777293 | 61 | 21 | 40 | 0 | 191 | 9 | 1 | 61 | WP_149487666.1 ABC transporter permease [Oceanispirochaeta crateris] | diamond | 183 | 91.3 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Spirochaetaceae | Oceanispirochaeta | Oceanispirochaeta crateris | ||
| 28864825 | 28864825 | PRJEB28062_P_NODE_63168_length_438_cov_7.969863_g60807_i0 | PRJEB28062 | 63168 | 438 | 7.969863 | 34.90799994 | Treponemataceae bacterium | 2854022 | Bacteria | Bacteria | 87.4 | 2.8e-17 | NR | MCQ2579721.1 | 2854022 | g60807 | i0 | 39.7 | 0.863013698630137 | 126 | 68 | 82.2 | 2 | 20 | 379 | 70 | 193 | MCQ2579721.1 AraC family transcriptional regulator [Treponemataceae bacterium] | diamond | 378 | 87.4 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponemataceae bacterium | |||
| 28896323 | 28896323 | PRJEB28062_P_NODE_137028_length_208_cov_4.237037_g134664_i0 | PRJEB28062 | 137028 | 208 | 4.237037 | 8.81303696 | Spirochaetota bacterium | 2202144 | Bacteria | Bacteria | 70.1 | 8.46e-14 | NR | HPF05317.1 | 2202144 | g134664 | i0 | 96.7 | 0.432692307692308 | 30 | 1 | 43.3 | 0 | 91 | 2 | 1 | 30 | HPF05317.1 hypothetical protein [Spirochaetota bacterium] | diamond | 90 | 70.1 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetota bacterium | ||||||
| 28896335 | 28896335 | PRJEB28062_P_NODE_50568_length_501_cov_6.446262_g48219_i0 | PRJEB28062 | 50568 | 501 | 6.446262 | 32.29577262 | Spirochaetota bacterium | 2202144 | Bacteria | Bacteria | 300 | 1.919999999999999e-96 | NR | HOP29525.1 | 2202144 | g48219 | i0 | 90.6 | 0.952095808383233 | 159 | 15 | 95.2 | 0 | 499 | 23 | 436 | 594 | HOP29525.1 PAS domain S-box protein [Spirochaetota bacterium] | diamond | 477 | 300 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetota bacterium | ||||||
| 29306829 | 29306829 | PRJEB28062_P_NODE_131209_length_240_cov_2.107784_g128845_i0 | PRJEB28062 | 131209 | 240 | 2.107784 | 5.0586816 | Sphaerochaetaceae bacterium | 2791017 | Bacteria | Bacteria | 43.1 | 0.0129 | NR | MCR5760452.1 | 2791017 | g128845 | i0 | 36.2 | 1.175 | 47 | 30 | 58.8 | 0 | 200 | 60 | 54 | 100 | MCR5760452.1 RpiB/LacA/LacB family sugar-phosphate isomerase [Sphaerochaetaceae bacterium] | diamond | 282 | 43.1 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Sphaerochaetaceae | Sphaerochaetaceae bacterium | |||
| 29370137 | 29370137 | PRJEB28062_P_NODE_60249_length_451_cov_3.722222_g57889_i0 | PRJEB28062 | 60249 | 451 | 3.722222 | 16.78722122 | Treponema sp. | 166 | Bacteria | Bacteria | 167 | 3.939999999999999e-48 | NR | NLJ45030.1 | 166 | g57889 | i0 | 100 | 0.552106430155211 | 83 | 0 | 55.2 | 0 | 269 | 21 | 181 | 263 | NLJ45030.1 zinc ABC transporter solute-binding protein [Treponema sp.] | diamond | 249 | 167 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema sp. | ||
| 29432878 | 29432878 | PRJEB28062_P_NODE_124770_length_250_cov_1.661017_g122406_i0 | PRJEB28062 | 124770 | 250 | 1.661017 | 4.1525425 | Spirochaetota bacterium | 2202144 | Bacteria | Bacteria | 128 | 4.34e-34 | NR | HOP29018.1 | 2202144 | g122406 | i0 | 80.8 | 1.752 | 73 | 14 | 87.6 | 0 | 32 | 250 | 1 | 73 | HOP29018.1 MBL fold metallo-hydrolase [Spirochaetota bacterium] | diamond | 438 | 128 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetota bacterium | ||||||
| 29521439 | 29521439 | PRJEB28062_P_NODE_40570_length_570_cov_16.496982_g38236_i0 | PRJEB28062 | 40570 | 570 | 16.496982 | 94.0327974 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 124 | 6.98e-30 | NR | TXH08468.1 | 2202144 | g38236 | i0 | 40.2 | 1.72631578947368 | 164 | 91 | 85.3 | 2 | 1 | 486 | 241 | 399 | TXH08468.1 MAG: hypothetical protein E6R04_10600 [Spirochaetota bacterium] | diamond | 984 | 124 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetota bacterium | ||||||
| 29653862 | 29653862 | PRJEB28062_P_NODE_8770_length_1319_cov_80.401284_g7277_i0 | PRJEB28062 | 8770 | 1319 | 80.401284 | 1060.49293596 | Spirochaetota bacterium | 2202144 | Bacteria | Bacteria | 281 | 1.78e-85 | NR | HOP30955.1 | 2202144 | g7277 | i0 | 92.9 | 0.350265352539803 | 154 | 11 | 35 | 0 | 22 | 483 | 392 | 545 | HOP30955.1 histidine kinase dimerization/phosphoacceptor domain -containing protein [Spirochaetota bacterium] | diamond | 462 | 281 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetota bacterium | ||||||
| 29748680 | 29748680 | PRJEB28062_P_NODE_70491_length_409_cov_49.514881_g68130_i0 | PRJEB28062 | 70491 | 409 | 49.514881 | 202.51586329 | Spirochaetota bacterium | 2202144 | Bacteria | Bacteria | 161 | 4.85e-46 | NR | HPF06547.1 | 2202144 | g68130 | i0 | 88.6 | 0.579462102689487 | 79 | 9 | 57.9 | 0 | 391 | 155 | 234 | 312 | HPF06547.1 acyltransferase [Spirochaetota bacterium] | diamond | 237 | 161 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetota bacterium | ||||||
| 29875348 | 29875348 | PRJEB28062_P_NODE_49591_length_507_cov_2.981567_g47243_i0 | PRJEB28062 | 49591 | 507 | 2.981567 | 15.11654469 | Spirochaetota bacterium | 2202144 | Bacteria | Bacteria | 280 | 8.9e-85 | NR | HOP30433.1 | 2202144 | g47243 | i0 | 87 | 0.952662721893491 | 161 | 21 | 95.3 | 0 | 2 | 484 | 359 | 519 | HOP30433.1 PAS domain S-box protein [Spirochaetota bacterium] | diamond | 483 | 280 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetota bacterium | ||||||
| 29906971 | 29906971 | PRJEB28062_P_NODE_137931_length_200_cov_5.409449_g135567_i0 | PRJEB28062 | 137931 | 200 | 5.409449 | 10.818898 | Spirochaetota bacterium | 2202144 | Bacteria | Bacteria | 39.7 | 0.0456 | NR | HOP64218.1 | 2202144 | g135567 | i0 | 88.9 | 0.27 | 18 | 2 | 27 | 0 | 132 | 185 | 1 | 18 | HOP64218.1 cold shock domain-containing protein [Spirochaetota bacterium] | diamond | 54 | 39.7 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetota bacterium | ||||||
| 30064704 | 30064704 | PRJEB28062_P_NODE_45612_length_532_cov_13.505447_g43272_i0 | PRJEB28062 | 45612 | 532 | 13.505447 | 71.84897804 | Spirochaetota bacterium | 2202144 | Bacteria | Bacteria | 225 | 7.91e-65 | NR | HOP28708.1 | 2202144 | g43272 | i0 | 68.7 | 0.919172932330827 | 163 | 51 | 91.9 | 0 | 17 | 505 | 391 | 553 | HOP28708.1 ankyrin repeat domain-containing protein [Spirochaetota bacterium] | diamond | 489 | 225 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetota bacterium | ||||||
| 30127704 | 30127704 | PRJEB28062_P_NODE_114472_length_274_cov_5.159204_g112109_i0 | PRJEB28062 | 114472 | 274 | 5.159204 | 14.13621896 | Spirochaetales bacterium | 2026792 | Bacteria | Bacteria | 69.3 | 6.96e-13 | NR | RPI97193.1 | 2026792 | g112109 | i0 | 38.2 | 0.832116788321168 | 76 | 47 | 83.2 | 0 | 21 | 248 | 18 | 93 | RPI97193.1 MAG: hypothetical protein EHM32_01980 [Spirochaetales bacterium] | diamond | 228 | 69.3 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Spirochaetales bacterium | ||||
| 30191097 | 30191097 | PRJEB28062_P_NODE_99732_length_315_cov_21.161157_g97370_i0 | PRJEB28062 | 99732 | 315 | 21.161157 | 66.65764455 | Spirochaetota bacterium | 2202144 | Bacteria | Bacteria | 166 | 4.1799999999999997e-47 | NR | HPF07287.1 | 2202144 | g97370 | i0 | 78.9 | 1.80952380952381 | 95 | 20 | 90.5 | 0 | 310 | 26 | 24 | 118 | HPF07287.1 putative glycoside hydrolase [Spirochaetota bacterium] | diamond | 570 | 166 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetota bacterium | ||||||
| 30254649 | 30254649 | PRJEB28062_P_NODE_111692_length_282_cov_1.425837_g109329_i0 | PRJEB28062 | 111692 | 282 | 1.425837 | 4.02086034 | Spirochaetota bacterium | 2202144 | Bacteria | Bacteria | 95.5 | 2.85e-21 | NR | HOP28955.1 | 2202144 | g109329 | i0 | 82.8 | 0.617021276595745 | 58 | 10 | 61.7 | 0 | 199 | 26 | 104 | 161 | HOP28955.1 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA [Spirochaetota bacterium] | diamond | 174 | 95.5 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetota bacterium | ||||||
| 30444074 | 30444074 | PRJEB28062_P_NODE_106033_length_297_cov_2.941964_g103670_i0 | PRJEB28062 | 106033 | 297 | 2.941964 | 8.73763308 | Spirochaetota bacterium | 2202144 | Bacteria | Bacteria | 167 | 1.1399999999999999e-48 | NR | HOP29110.1 | 2202144 | g103670 | i0 | 90.5 | 0.95959595959596 | 95 | 9 | 96 | 0 | 5 | 289 | 212 | 306 | HOP29110.1 branched-chain amino acid ABC transporter permease [Spirochaetota bacterium] | diamond | 285 | 167 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetota bacterium | ||||||
| 30658655 | 30658655 | PRJEB28062_P_NODE_102093_length_308_cov_27.029787_g99730_i0 | PRJEB28062 | 102093 | 308 | 27.029787 | 83.25174396 | Bacteria | 2 | Bacteria | Bacteria | 55.1 | 3.75e-6 | NR | MCK9601122.1 | 1972642 | g99730 | i0 | 38.8 | 3.35064935064935 | 80 | 43 | 72.1 | 2 | 263 | 42 | 689 | 768 | MCK9601122.1 DNA polymerase [Sphaerochaeta sp.] | diamond | 1032 | 55.1 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Sphaerochaetaceae | Sphaerochaeta | Sphaerochaeta sp. | ||
| 30791471 | 30791471 | PRJEB28062_P_NODE_105094_length_300_cov_1.480176_g102731_i0 | PRJEB28062 | 105094 | 300 | 1.480176 | 4.440528 | Sphaerochaetaceae bacterium | 2791017 | Bacteria | Bacteria | 187 | 2.17e-58 | NR | MFA6690227.1 | 2791017 | g102731 | i0 | 91.8 | 0.97 | 97 | 8 | 97 | 0 | 293 | 3 | 37 | 133 | MFA6690227.1 hypothetical protein [Sphaerochaetaceae bacterium] | diamond | 291 | 187 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Sphaerochaetaceae | Sphaerochaetaceae bacterium | |||
| 30981300 | 30981300 | PRJEB28062_P_NODE_78354_length_382_cov_13.042071_g75992_i0 | PRJEB28062 | 78354 | 382 | 13.042071 | 49.82071122 | Spirochaetota bacterium | 2202144 | Bacteria | Bacteria | 133 | 8.97e-35 | NR | HPK45277.1 | 2202144 | g75992 | i0 | 56.8 | 0.871727748691099 | 111 | 45 | 87.2 | 1 | 36 | 368 | 58 | 165 | HPK45277.1 kelch repeat-containing protein [Spirochaetota bacterium] | diamond | 333 | 133 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetota bacterium | ||||||
| 31012684 | 31012684 | PRJEB28062_P_NODE_93195_length_335_cov_3.618321_g90833_i0 | PRJEB28062 | 93195 | 335 | 3.618321 | 12.12137535 | Spirochaetota bacterium | 2202144 | Bacteria | Bacteria | 145 | 1.18e-37 | NR | HPJ43259.1 | 2202144 | g90833 | i0 | 63.1 | 1.84477611940299 | 103 | 38 | 92.2 | 0 | 3 | 311 | 189 | 291 | HPJ43259.1 ABC transporter substrate binding protein [Spirochaetota bacterium] | diamond | 618 | 145 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetota bacterium | ||||||
| 31392185 | 31392185 | PRJEB28062_P_NODE_132596_length_234_cov_5.378882_g130232_i0 | PRJEB28062 | 132596 | 234 | 5.378882 | 12.58658388 | Spirochaetota bacterium | 2202144 | Bacteria | Bacteria | 108 | 1.1e-26 | NR | HQO39032.1 | 2202144 | g130232 | i0 | 72 | 4.61538461538461 | 75 | 21 | 96.2 | 0 | 3 | 227 | 94 | 168 | HQO39032.1 NADH-quinone oxidoreductase subunit H [Spirochaetota bacterium] | diamond | 1080 | 108 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetota bacterium | ||||||
| 31929714 | 31929714 | PRJEB28062_P_NODE_84037_length_364_cov_2.735395_g81675_i0 | PRJEB28062 | 84037 | 364 | 2.735395 | 9.9568378 | Sphaerochaetaceae bacterium | 2791017 | Bacteria | Bacteria | 219 | 1.29e-69 | NR | MFA6935580.1 | 2791017 | g81675 | i0 | 95.5 | 0.914835164835165 | 111 | 5 | 91.5 | 0 | 343 | 11 | 22 | 132 | MFA6935580.1 hypothetical protein [Sphaerochaetaceae bacterium] | diamond | 333 | 219 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Sphaerochaetaceae | Sphaerochaetaceae bacterium | |||
| 32467916 | 32467916 | PRJEB28062_P_NODE_67599_length_420_cov_11.829971_g65238_i0 | PRJEB28062 | 67599 | 420 | 11.829971 | 49.6858782 | Treponema vincentii | 69710 | Bacteria | Bacteria | 89.7 | 1.59e-20 | NR | WP_253807517.1 | 69710 | g65238 | i0 | 83.3 | 0.385714285714286 | 54 | 9 | 38.6 | 0 | 339 | 178 | 9 | 62 | WP_253807517.1 hypothetical protein [Treponema vincentii] | diamond | 162 | 89.7 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema vincentii | ||
| 32562851 | 32562851 | PRJEB28062_P_NODE_97899_length_321_cov_2.959677_g95537_i0 | PRJEB28062 | 97899 | 321 | 2.959677 | 9.50056317 | uncultured spirochete | 156406 | Bacteria | Bacteria | 82.8 | 2.36e-17 | NR | SLM18075.1 | 156406 | g95537 | i0 | 73.6 | 0.495327102803738 | 53 | 14 | 49.5 | 0 | 317 | 159 | 103 | 155 | SLM18075.1 Phosphinothricin N-acetyltransferase [uncultured spirochete] | diamond | 159 | 82.8 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | uncultured spirochete | ||||
| 32656721 | 32656721 | PRJEB28062_P_NODE_80880_length_374_cov_4.056478_g78518_i0 | PRJEB28062 | 80880 | 374 | 4.056478 | 15.17122772 | Treponema denticola | 158 | Bacteria | Bacteria | 179 | 8.479999999999999e-52 | NR | WP_002666054.1 | 158 | g78518 | i0 | 89.3 | 0.898395721925134 | 112 | 12 | 89.8 | 0 | 17 | 352 | 222 | 333 | WP_002666054.1 APC family permease [Treponema denticola] | diamond | 336 | 179 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema denticola | ||
| 32751496 | 32751496 | PRJEB28062_P_NODE_53940_length_482_cov_3.286064_g51587_i0 | PRJEB28062 | 53940 | 482 | 3.286064 | 15.83882848 | Spirochaetota bacterium | 2202144 | Bacteria | Bacteria | 125 | 8.989999999999998e-30 | NR | MBN2401414.1 | 2202144 | g51587 | i0 | 45.9 | 4.49377593360996 | 146 | 79 | 90.9 | 0 | 18 | 455 | 495 | 640 | MBN2401414.1 PAS domain S-box protein [Spirochaetota bacterium] | diamond | 2166 | 125 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetota bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;