RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJEB28062", tax_kingdom = "Pararnavirae" and tax_superkingdom = "Viruses"

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tax_superkingdom 1

  • Viruses · 3 ✖

tax_phylum 1

tax_kingdom 1

  • Pararnavirae · 3 ✖

bioproject 1

  • PRJEB28062 · 3 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6090737 6090737 PRJEB28062_P_NODE_5385_length_1721_cov_263.111044_g1163_i2 PRJEB28062 5385 1721 263.111044 4528.14106724 root 1 Root_unresolved Root_unresolved 1788 0   NTclustered gi|331934|gb|J02255.1|MLMCG 11786 g1163 i2 99.897 95.2016269610692 971 1 100 0 238 1208 2619 3589 Moloney murine leukemia virus, complete genome blastn 163842 1788 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Retroviridae Gammaretrovirus Gammaretrovirus murleu
21389364 21389364 PRJEB28062_P_NODE_1877_length_3061_cov_316.281459_g1163_i0 PRJEB28062 1877 3061 316.281459 9681.37545999 Gammaretrovirus 153135 Viruses Viruses 2473 0   NTclustered gi|331934|gb|J02255.1|MLMCG 11786 g1163 i0 100 97.9003593596864 1339 0 100 0 238 1576 2619 3957 Moloney murine leukemia virus, complete genome blastn 299673 2473 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Retroviridae Gammaretrovirus Gammaretrovirus murleu
22664313 22664313 PRJEB28062_P_NODE_3318_length_2242_cov_290.816044_g1163_i1 PRJEB28062 3318 2242 290.816044 6520.09570648 Gammaretrovirus 153135 Viruses Viruses 3650 0   NTclustered gi|331934|gb|J02255.1|MLMCG 11786 g1163 i1 99.899 90.7992863514719 1982 2 94 0 119 2100 2619 4600 Moloney murine leukemia virus, complete genome blastn 203572 3650 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Retroviridae Gammaretrovirus Gammaretrovirus murleu

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;