RNAquarium Metadata Server
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contig_metadata

6 rows where bioproject = "PRJEB28062", tax_kingdom = "Loebvirae" and tax_superkingdom = "Viruses"

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tax_superkingdom 1

  • Viruses · 6 ✖

tax_phylum 1

tax_kingdom 1

  • Loebvirae · 6 ✖

bioproject 1

  • PRJEB28062 · 6 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5126685 5126685 PRJEB28062_P_NODE_20725_length_823_cov_49.481333_g18637_i0 PRJEB28062 20725 823 49.481333 407.23137059 Scuticavirus SMA6 2011078 Viruses Viruses 693 0   NTclustered gi|1694995567|ref|NC_043029.1| 1346893 g18637 i0 90.093 17.6524908869988 535 51 65 2 29 562 6115 6648 Stenotrophomonas phage phiSMA6 proviral complete genome blastn 14528 693 1 Viruses   Loebvirae Hofneiviricota Faserviricetes Tubulavirales Inoviridae Scuticavirus Scuticavirus SMA6
6401998 6401998 PRJEB28062_P_NODE_124026_length_251_cov_2.589888_g121662_i0 PRJEB28062 124026 251 2.589888 6.50061888 Thermus phage Zuza8 3134925 Viruses Viruses 316 7.31e-82   NTclustered gi|2720503827|gb|PP554188.1| 3134925 g121662 i0 96.825 0.752988047808765 189 6 75 0 47 235 950 1138 Thermus phage Zuza8, complete genome blastn 189 316 1 Viruses   Loebvirae Hofneiviricota Faserviricetes Tubulavirales Paulinoviridae Thomixvirus Thermus phage Zuza8
7677233 7677233 PRJEB28062_P_NODE_53447_length_485_cov_1.446602_g51094_i0 PRJEB28062 53447 485 1.446602 7.0160197 Thermus phage Zuza8 3134925 Viruses Viruses 784 0   NTclustered gi|2720503827|gb|PP554188.1| 3134925 g51094 i0 97.192 0.954639175257732 463 13 95 0 23 485 6688 6226 Thermus phage Zuza8, complete genome blastn 463 784 1 Viruses   Loebvirae Hofneiviricota Faserviricetes Tubulavirales Paulinoviridae Thomixvirus Thermus phage Zuza8
8952051 8952051 PRJEB28062_P_NODE_55528_length_473_cov_20.320000_g53174_i0 PRJEB28062 55528 473 20.32 96.1136 Inoviridae sp. 2219103 Viruses Viruses 773 0   NTclustered gi|2054627565|tpg|BK022248.1| 2219103 g53174 i0 99.297 6.31923890063425 427 3 90 0 24 450 10872 10446 MAG TPA_asm: Inoviridae sp. isolate cteA81, partial genome blastn 2989 773 1 Viruses   Loebvirae Hofneiviricota Faserviricetes Tubulavirales Inoviridae   Inoviridae sp.
19151295 19151295 PRJEB28062_P_NODE_9256_length_1284_cov_6.340215_g7727_i0 PRJEB28062 9256 1284 6.340215 81.4083606 Inoviridae sp. 2219103 Viruses Viruses 1650 0   NTclustered gi|2053040871|tpg|BK024249.1| 2219103 g7727 i0 90.953 79.4820872274143 1238 94 96 13 23 1254 825 2050 MAG TPA_asm: Inoviridae sp. isolate ct4CW1, partial genome blastn 102055 1650 1 Viruses   Loebvirae Hofneiviricota Faserviricetes Tubulavirales Inoviridae   Inoviridae sp.
19151316 19151316 PRJEB28062_P_NODE_93436_length_334_cov_7.241379_g91074_i0 PRJEB28062 93436 334 7.241379 24.18620586 Thermus phage Zuza8 3134925 Viruses Viruses 327 4.67e-85   NTclustered gi|2720503827|gb|PP554188.1| 3134925 g91074 i0 86.667 0.898203592814371 300 35 89 4 27 323 2224 2521 Thermus phage Zuza8, complete genome blastn 300 327 1 Viruses   Loebvirae Hofneiviricota Faserviricetes Tubulavirales Paulinoviridae Thomixvirus Thermus phage Zuza8

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;