RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJEB28062", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Muiribacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Muiribacteriota · 1 ✖

tax_clade 1

  • Bacteria candidate phyla · 1 ✖

bioproject 1

  • PRJEB28062 · 1 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27886056 27886056 PRJEB28062_P_NODE_75665_length_391_cov_16.062893_g73303_i0 PRJEB28062 75665 391 16.062893 62.80591163 Candidatus Muiribacterium halophilum 2053465 Bacteria Bacteria 115 8.1e-27   NR MCK9475548.1 2053465 g73303 i0 46.6 0.89002557544757 116 50 89 1 368 21 304 407 MCK9475548.1 hypothetical protein [Candidatus Muiribacterium halophilum] diamond 348 115 1 Bacteria Bacteria candidate phyla   Candidatus Muiribacteriota Candidatus Muiribacteriia   Candidatus Muiribacteriaceae Candidatus Muiribacterium Candidatus Muiribacterium halophilum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;