RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

7 rows where bioproject = "PRJEB28062", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Kaiseribacteriota"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_phylum 1

  • Candidatus Kaiseribacteriota · 7 ✖

tax_clade 1

  • Bacteria candidate phyla · 7 ✖

bioproject 1

  • PRJEB28062 · 7 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7677569 7677569 PRJEB28062_P_NODE_69527_length_413_cov_4.800000_g67166_i0 PRJEB28062 69527 413 4.8 19.824 Candidatus Kaiserbacteria bacterium 2030810 Bacteria Bacteria 122 2.98e-23   NTclustered gi|1950807631|gb|CP066682.1| 2030810 g67166 i0 91.954 18.6900726392252 87 7 21 0 170 256 647085 646999 MAG: Candidatus Kaiserbacteria bacterium isolate NC_groundwater_79_Ag_B-0.1um_58_26 chromosome blastn 7719 122 1 Bacteria Bacteria candidate phyla   Candidatus Kaiseribacteriota         Candidatus Kaiserbacteria bacterium
26653081 26653081 PRJEB28062_P_NODE_75101_length_393_cov_12.571875_g72739_i0 PRJEB28062 75101 393 12.571875 49.40746875 Candidatus Kaiserbacteria bacterium 2030810 Bacteria Bacteria 100 7.46e-22   NR MCR4280907.1 2030810 g72739 i0 82.1 0.427480916030534 56 10 42.7 0 12 179 407 462 MCR4280907.1 replicative DNA helicase [Candidatus Kaiserbacteria bacterium] diamond 168 100 1 Bacteria Bacteria candidate phyla   Candidatus Kaiseribacteriota         Candidatus Kaiserbacteria bacterium
27570265 27570265 PRJEB28062_P_NODE_124964_length_250_cov_0.870056_g122600_i0 PRJEB28062 124964 250 0.870056 2.17514 Candidatus Kaiserbacteria bacterium RIFCSPHIGHO2_ 2030810 Bacteria Bacteria 104 1.55e-25   NR OGG52496.1 1798486 g122600 i0 65.8 4.632 76 26 91.2 0 10 237 149 224 OGG52496.1 MAG: hypothetical protein A2764_00810 [Candidatus Kaiserbacteria bacterium RIFCSPHIGHO2_01_FULL_55_79] diamond 1158 104 1 Bacteria Bacteria candidate phyla   Candidatus Kaiseribacteriota         Candidatus Kaiserbacteria bacterium RIFCSPHIGHO2_01_FULL_55_79
28486025 28486025 PRJEB28062_P_NODE_90947_length_342_cov_3.026022_g88585_i0 PRJEB28062 90947 342 3.026022 10.34899524 Candidatus Kaiserbacteria bacterium 2030810 Bacteria Bacteria 76.3 2.22e-15   NR MBI4093559.1 2030810 g88585 i0 58.8 0.596491228070175 68 28 59.6 0 137 340 1 68 MBI4093559.1 helix-turn-helix transcriptional regulator [Candidatus Kaiserbacteria bacterium] diamond 204 76.3 1 Bacteria Bacteria candidate phyla   Candidatus Kaiseribacteriota         Candidatus Kaiserbacteria bacterium
29275161 29275161 PRJEB28062_P_NODE_124989_length_250_cov_0.870056_g122625_i0 PRJEB28062 124989 250 0.870056 2.17514 Candidatus Kaiserbacteria bacterium 2030810 Bacteria Bacteria 108 1.05e-25   NR MCX6787127.1 2030810 g122625 i0 68 0.9 75 24 90 0 249 25 324 398 MCX6787127.1 hypothetical protein [Candidatus Kaiserbacteria bacterium] diamond 225 108 1 Bacteria Bacteria candidate phyla   Candidatus Kaiseribacteriota         Candidatus Kaiserbacteria bacterium
31075964 31075964 PRJEB28062_P_NODE_111555_length_282_cov_2.779904_g109192_i0 PRJEB28062 111555 282 2.779904 7.83932928 Candidatus Kaiserbacteria bacterium RIFCSPHIGHO2_ 2030810 Bacteria Bacteria 97.8 2.35e-24   NR OGG51532.1 1798483 g109192 i0 77 0.648936170212766 61 14 64.9 0 51 233 1 61 OGG51532.1 MAG: hypothetical protein A2704_00745 [Candidatus Kaiserbacteria bacterium RIFCSPHIGHO2_01_FULL_54_36b] diamond 183 97.8 1 Bacteria Bacteria candidate phyla   Candidatus Kaiseribacteriota         Candidatus Kaiserbacteria bacterium RIFCSPHIGHO2_01_FULL_54_36b
31392232 31392232 PRJEB28062_P_NODE_99296_length_317_cov_1.815574_g96934_i0 PRJEB28062 99296 317 1.815574 5.75536958 Candidatus Kaiserbacteria bacterium RIFCSPHIGHO2_ 2030810 Bacteria Bacteria 76.6 1.11e-13   NR OGG49951.1 1798482 g96934 i0 69.8 0.501577287066246 53 16 50.2 0 1 159 252 304 OGG49951.1 MAG: hypothetical protein A2763_00320 [Candidatus Kaiserbacteria bacterium RIFCSPHIGHO2_01_FULL_54_36] diamond 159 76.6 1 Bacteria Bacteria candidate phyla   Candidatus Kaiseribacteriota         Candidatus Kaiserbacteria bacterium RIFCSPHIGHO2_01_FULL_54_36

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;