RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJEB28062", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Altimarinota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Altimarinota · 2 ✖

tax_clade 1

  • Bacteria candidate phyla · 2 ✖

bioproject 1

  • PRJEB28062 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29275150 29275150 PRJEB28062_P_NODE_103029_length_306_cov_1.532189_g100666_i0 PRJEB28062 103029 306 1.532189 4.68849834 Candidatus Gracilibacteria bacterium GN 2044595 Bacteria Bacteria 77.8 3.64e-14   NR RAL55457.1 1914866 g100666 i0 41.7 2.08823529411765 103 48 100 3 306 1 190 281 RAL55457.1 hypothetical protein BLM37_04420 [Candidatus Gracilibacteria bacterium GN02-873] diamond 639 77.8 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Gracilibacteria bacterium GN02-873
30096273 30096273 PRJEB28062_P_NODE_36932_length_601_cov_178.284091_g34605_i0 PRJEB28062 36932 601 178.284091 1071.48738691 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 44.7 0.0151   NR MFA5829021.1 2044595 g34605 i0 46.2 0.439267886855241 39 21 19.5 0 361 477 3 41 MFA5829021.1 hypothetical protein [Candidatus Altimarinota bacterium] diamond 264 44.7 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;