RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJEB27957" and tax_phylum = "Microsporidia"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Microsporidia · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB27957 · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
12776964 12776964 PRJEB27957_P_NODE_125511_length_162_cov_0.920354_g125401_i0 PRJEB27957 125511 162 0.920354 1.49097348 Vairimorpha necatrix 6039 Fungi Fungi 54.7 0.004   NTclustered gi|2735586064|ref|XM_065474228.1| 6039 g125401 i0 92.308 0.240740740740741 39 1 23 2 44 80 5576 5538 Vairimorpha necatrix uncharacterized protein (VNE69_07221), partial mRNA blastn 39 54.7 1 Eukaryota Opisthokonta Fungi Microsporidia     Nosematidae Vairimorpha Vairimorpha necatrix
29717070 29717070 PRJEB27957_P_NODE_59790_length_216_cov_1.556886_g59680_i0 PRJEB27957 59790 216 1.556886 3.36287376 Hamiltosporidium magnivora 148818 Fungi Fungi 44.7 0.0057   NR TBU08685.1 148818 g59680 i0 37.9 1.83333333333333 66 38 88.9 2 16 207 612 676 TBU08685.1 hypothetical protein CWI36_0108p0040, partial [Hamiltosporidium magnivora] diamond 396 44.7 1 Eukaryota Opisthokonta Fungi Microsporidia     Dubosqiidae Hamiltosporidium Hamiltosporidium magnivora

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;