RNAquarium Metadata Server
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contig_metadata

6 rows where bioproject = "PRJEB27957" and tax_kingdom = "Orthornavirae"

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analysis 2

tax_superkingdom 1

tax_kingdom 1

  • Orthornavirae · 6 ✖

bioproject 1

  • PRJEB27957 · 6 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
13740249 13740249 PRJEB27957_P_NODE_102971_length_169_cov_1.300000_g102861_i0 PRJEB27957 102971 169 1.3 2.197 Orthornavirae 2732396 Viruses Viruses 69.4 1.4e-7   NTclustered gi|2183423903|gb|MZ679790.1| 2027243 g102861 i0 97.5 7.98816568047337 40 1 24 0 130 169 3167 3206 MAG: Leviviridae sp. isolate R28-k141_67620 genomic sequence blastn 1350 69.4 1 Viruses   Orthornavirae Lenarviricota Leviviricetes Norzivirales Fiersviridae   Leviviridae sp.
15325561 15325561 PRJEB27957_P_NODE_109413_length_167_cov_0.881356_g109303_i0 PRJEB27957 109413 167 0.881356 1.47186452 Botourmiaviridae sp. 2808997 Viruses Viruses 117 4.900000000000001e-22   NTclustered gi|2396039588|gb|ON812873.1| 2808997 g109303 i0 80.368 0.976047904191617 163 24 95 7 1 159 1260 1102 MAG: Botourmiaviridae sp. isolate TIGMIC_5, complete genome blastn 163 117 1 Viruses   Orthornavirae Lenarviricota Miaviricetes Ourlivirales Botourmiaviridae   Botourmiaviridae sp.
20424102 20424102 PRJEB27957_P_NODE_26197_length_297_cov_10.806452_g26087_i0 PRJEB27957 26197 297 10.806452 32.09516244 Lagomorph hepacivirus 3138818 Viruses Viruses 52.8 0.028   NTclustered gi|2716363320|gb|OQ576737.1| 3138818 g26087 i0 100 0.0942760942760943 28 0 9 0 100 127 2440 2467 Lagomorph hepacivirus isolate USA/CA/Orange/30026-1/2020 polyprotein gene, complete cds blastn 28 52.8 1 Viruses   Orthornavirae Kitrinoviricota Flasuviricetes Amarillovirales Flaviviridae   Lagomorph hepacivirus
27696961 27696961 PRJEB27957_P_NODE_116544_length_165_cov_0.896552_g116434_i0 PRJEB27957 116544 165 0.896552 1.4793108 Betachrysovirus aspergilli 2164061 Viruses Viruses 66.2 6.51e-11   NR YP_010088028.1 2164061 g116434 i0 62 0.909090909090909 50 19 90.9 0 15 164 248 297 YP_010088028.1 RNA-dependent RNA polymerase [Betachrysovirus aspergilli] diamond 150 66.2 1 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales Chrysoviridae Betachrysovirus Betachrysovirus aspergilli
29837106 29837106 PRJEB27957_P_NODE_107111_length_168_cov_0.873950_g107001_i0 PRJEB27957 107111 168 0.87395 1.468236 Umbravirus 39734 Viruses Viruses 51.2 1.35e-5   NR QKW91260.1 2231771 g107001 i0 47.2 3.78571428571429 53 28 94.6 0 3 161 82 134 QKW91260.1 replication associated protein [Sclerotinia sclerotiorum umbra-like virus 3] diamond 636 51.2 1 Viruses   Orthornavirae Kitrinoviricota Tolucaviricetes Tolivirales Tombusviridae Umbravirus Sclerotinia sclerotiorum umbra-like virus 3
31075960 31075960 PRJEB27957_P_NODE_108975_length_167_cov_0.881356_g108865_i0 PRJEB27957 108975 167 0.881356 1.47186452 Grapevine wood holobiome associated narna-like virus 6 3398663 Viruses Viruses 45.8 0.00105   NR XOD45342.1 3398663 g108865 i0 38.9 0.970059880239521 54 33 97 0 3 164 144 197 XOD45342.1 HP2 [Grapevine wood holobiome associated narna-like virus 6] diamond 162 45.8 1 Viruses   Orthornavirae Lenarviricota Amabiliviricetes Wolframvirales Narnaviridae   Grapevine wood holobiome associated narna-like virus 6

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;