RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJEB27957", tax_kingdom = "Metazoa" and tax_phylum = "Rotifera"

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tax_superkingdom 1

tax_phylum 1

  • Rotifera · 2 ✖

tax_kingdom 1

  • Metazoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJEB27957 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28106964 28106964 PRJEB27957_P_NODE_21405_length_321_cov_1.720588_g21295_i0 PRJEB27957 21405 321 1.720588 5.52308748 Adineta ricciae 249248 Rotifera other_Eukaryota 45.4 0.00971   NR CAF1052964.1 249248 g21295 i0 40 0.607476635514019 65 38 60.7 1 195 1 288 351 CAF1052964.1 unnamed protein product [Adineta ricciae] diamond 195 45.4 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta ricciae
30886253 30886253 PRJEB27957_P_NODE_27974_length_290_cov_1.622407_g27864_i0 PRJEB27957 27974 290 1.622407 4.7049803 Rotaria magnacalcarata 392030 Rotifera other_Eukaryota 45.1 0.00381   NR CAF2094018.1 392030 g27864 i0 39.3 0.579310344827586 56 34 57.9 0 252 85 23 78 CAF2094018.1 unnamed protein product [Rotaria magnacalcarata] diamond 168 45.1 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Rotaria Rotaria magnacalcarata

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;