RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJEB27957", tax_kingdom = "Bacillati" and tax_phylum = "Chloroflexota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Chloroflexota · 4 ✖

tax_kingdom 1

  • Bacillati · 4 ✖

bioproject 1

  • PRJEB27957 · 4 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
16600234 16600234 PRJEB27957_P_NODE_58494_length_218_cov_1.230769_g58384_i0 PRJEB27957 58494 218 1.230769 2.68307642 Anaerolineales bacterium 2073117 Bacteria Bacteria 52.8 0.019   NTclustered gi|2556899361|gb|CP129481.1| 2073117 g58384 i0 100 0.128440366972477 28 0 13 0 69 96 3037115 3037088 MAG: Anaerolineales bacterium isolate cMAG.15 chromosome, complete genome blastn 28 52.8 1 Bacteria   Bacillati Chloroflexota Anaerolineae Anaerolineales     Anaerolineales bacterium
28580799 28580799 PRJEB27957_P_NODE_43487_length_244_cov_2.835897_g43377_i0 PRJEB27957 43487 244 2.835897 6.91958868 Anaerolineales bacterium 2073117 Bacteria Bacteria 45.1 0.00552   NR MFN2303732.1 2073117 g43377 i0 43.4 0.651639344262295 53 30 65.2 0 221 63 70 122 MFN2303732.1 hypothetical protein [Anaerolineales bacterium] diamond 159 45.1 1 Bacteria   Bacillati Chloroflexota Anaerolineae Anaerolineales     Anaerolineales bacterium
28927973 28927973 PRJEB27957_P_NODE_81088_length_190_cov_1.843972_g80978_i0 PRJEB27957 81088 190 1.843972 3.5035468 Ktedonobacteraceae bacterium 2740538 Bacteria Bacteria 42.4 0.023   NR HZU01227.1 2740538 g80978 i0 37 0.852631578947368 54 30 80.5 2 17 169 51 103 HZU01227.1 Uma2 family endonuclease [Ktedonobacteraceae bacterium] diamond 162 42.4 1 Bacteria   Bacillati Chloroflexota Ktedonobacteria Ktedonobacterales Ktedonobacteraceae   Ktedonobacteraceae bacterium
29780470 29780470 PRJEB27957_P_NODE_90911_length_180_cov_1.832061_g90801_i0 PRJEB27957 90911 180 1.832061 3.2977098 Leptolinea sp. 2699749 Bacteria Bacteria 43.1 0.0121   NR MEI8131021.1 2699749 g90801 i0 36.5 1.05 63 33 93.3 2 1 168 414 476 MEI8131021.1 hypothetical protein [Leptolinea sp.] diamond 189 43.1 1 Bacteria   Bacillati Chloroflexota Anaerolineae Anaerolineales Anaerolineaceae Leptolinea Leptolinea sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;