RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJEB27957", tax_kingdom = "Bacillati" and tax_phylum = "Armatimonadota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Armatimonadota · 2 ✖

tax_kingdom 1

  • Bacillati · 2 ✖

bioproject 1

  • PRJEB27957 · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5125785 5125785 PRJEB27957_P_NODE_106005_length_168_cov_1.226891_g105895_i0 PRJEB27957 106005 168 1.226891 2.06117688 Armatimonadetes bacterium Uphvl-Ar1 2004467 Bacteria Bacteria 52.8 0.014   NTclustered gi|1199098093|gb|CP021423.1| 2004467 g105895 i0 100 0.166666666666667 28 0 17 0 13 40 1534704 1534677 Armatimonadetes bacterium Uphvl-Ar1 genome blastn 28 52.8 1 Bacteria   Bacillati Armatimonadota         Armatimonadetes bacterium Uphvl-Ar1
28391217 28391217 PRJEB27957_P_NODE_46586_length_238_cov_1.349206_g46476_i0 PRJEB27957 46586 238 1.349206 3.21111028 Armatimonadota bacterium 2033014 Bacteria Bacteria 43.9 0.013   NR MBI3998175.1 2033014 g46476 i0 51.4 0.441176470588235 35 17 44.1 0 119 15 356 390 MBI3998175.1 argininosuccinate synthase [Armatimonadota bacterium] diamond 105 43.9 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;